Detailed information on CNT30678384


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553095Setaria viridisOryza glaberrima19.3521.1190.4884reverse complement

Expression of CNT30678384

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MAPSFQTRNAVPNMMVVMSVKDTRTRKTSTPPWASRACCRRTGGSCMLIPRRGAQQQELMEG*

>peptide 2 (41 aa)
KHIISMFSKICAKPRPTINILVQNQAILSPSTASLQESPQS*

>peptide 3 (30 aa)
QTHHFYVLKNLCQTTADDQYTSTEPSNSLT*

Sequence

>CNT30678384
ACAAACACATCATTTCTATGTTCTCAAAAATCTGTGCCAAACCACGGCCGACGATCAATATACTAGTACAGAACCAAGCAATTCTCTCACCTAGCACTGC
AAGTCTGCAAGAATCACCCCAAAGCTAGAGACAATCTACAGGCTAGTACTCGTTGAAGTGTATGGCGCCGAGCTTCCAGACGAGGAATGCGGTGCCGAAC
ATGATGGTGGTGATGAGCGTGAAGGACACGAGGACGAGGAAGACGTCCACCCCTCCTTGGGCATCCCGCGCTTGCTGTCGTCGAACAGGTGGTTCTTGCA
TGCTTATTCCTCGCCGGGGAGCTCAGCAGCAGGAGCTTATGGAAGGCTGAAGCCGCCGCCGCCTTCTGGAAGTGATGCCTCGAGCCGAAGCTGAGCTGGG
TGTAGGACGACGAAGATCTGGGGACTCCCGGTAG