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Detailed information on CNT30678104


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595951Setaria viridisOryza meridionalis11.6743.2696.7793forward

Expression of CNT30678104

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MKRTPLTTKALATSTKRQNHNNHGQRRGGCWLCSLGTKPLQLLSTA*

>peptide 2 (36 aa)
MFSHRVLKKNGVDGLRRFLMCCSRALMSLPDGSLAT*

>peptide 3 (61 aa)
RLDQLCGSIIVRDVQPQGVEEEWGGWAEEVLDVLLKSIDVLARWVLGNLNDKQRHMVNVTK*

Sequence

>CNT30678104
TTAGGCTTGACCAGCTGTGTGGGAGCATCATAGTCAGGGATGTTCAGCCACAGGGTGTTGAAGAAGAATGGGGTGGATGGGCTGAGGAGGTTCTTGATGT
GCTGCTCAAGAGCATTGATGTCCTTGCCCGATGGGTCCTTGGCAACCTGAATGACAAACAAAGACATATGGTTAATGTGACAAAATAGCATAAGTGCAAT
TATGTTGCTTGTTGTAAAATCACGATGTTGCTACTTATAGGATGACAAAAACTCGCAATTTGAGTGCATTGCTCGATATTACTGCCAATGTTTCAGACAG
ATCACGATGTTGAGTTCCACCCTCAACATTATGATCTAGTGGTGTGGATCTTACAAGGTGAAAGGTGAAAATTTCAAACAATGTCTAAGAGTTGAACCTG
GTAAAAGGTGAAAAAAATTTCACCCAGGTGTGAATTATAAAGAGCTAACCTAAGTTGACCTGAATTGTGCTTACTGCTCGGATCAGATCTGATTCGAGTA
TCCTAGTACTAGATCCAATGACAGCAGAGCATTACAATAAGTTTTGGCTAATGCATGCCAAGTTGTGATCCGCGACGGGATCACATAAACAAGGGCCCCT
GACCAAATGAAAAGGACCCCTCTAACGACAAAGGCACTAGCTACCAGTACTAAGCGGCAAAATCATAACAACCACGGGCAGAGGAGGGGTGGCTGCTGGC
TCTGTTCCCTCGGAACGAAGCCACTACAGTTACTGAGCACAGCATGATGTCACGGATCGAGATCCGCAATGCCAAACCACCACCCAAGCTACGGATC