Detailed information on CNT30677521


BLAST search results

BLAST vs Swiss-Prot:
sp|O82392|THIC_ARATH, E-value = 3e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30144834Setaria viridisMedicago truncatula38.9932.3585.5131forward
CNT3048758Setaria viridisCucumis sativus47.9228.9685.09161forward

Expression of CNT30677521

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MTLCQISSMSSNFVGYHTCLNIITIRQPKSSNVGRTNG*

Sequence

>CNT30677521
ATCCAGAGATAGAGCAAATTGGTCGAGCCATCTAAACTCAAACCTTGCCTTGCTAAGGGCATCATCCCAAGCTTGTGCGTAGGGATGACCCTTTGCCAAA
TCAGCAGCATGAGCAGCAATTTTGTAGGATATCACACCTGTCTTAACATCATCACGATTAGGCAACCCAAGAGCTCCAATGTTGGCCGCACCAATGGCTG
AGGTGATGTGGTCATAACCAGGTGCGATATCAGTTGTCAGTGGACCCAACGTATAGAAAGGTGCTTCATTACACCACTCCAGCTGTTTTTCCATGTTTTC
AGGAATTTTATGCATTGGGATGTGCCCTGGACCTTC