Detailed information on CNT30675958


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30510004Setaria viridisSolanum lycopersicum20.5215.4193.6247reverse complement
CNT30360275Setaria viridisLactuca sativa27.5114.0990.4863reverse complement

Expression of CNT30675958

Peptides detected in this lncRNA

>peptide 1 (35 aa)
GDLQDLHLQGAEAGAPRHRHLLQGRHQVHLLLGYS*

>peptide 2 (31 aa)
ETYKIYIFKVLKQVHPDIGISSKAVTKFTSS*

Sequence

>CNT30675958
GGAGACCTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCGTCACCAAGTTCACCTCCTCCTAGGTT
ATAGCTAGGCCCCGCCTGTGTAGACTCCTGTCTCTTGTTCATGTGCAACCTGCTCAGCGCAGTTACGGGATTTGGTTCCGACGGATGGTGTAGTTATATG
TTCTGGATGTATTCTCTCATGTAGGAAGT