Detailed information on CNT30675951


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639580Setaria viridisNymphaea colorata42.9222.6988.35103forward
CNT30544223Setaria viridisBrassica napus39.5821.6984.2195forward
CNT30601056Setaria viridisFraxinus excelsior77.0834.280.54185forward
CNT30680065Setaria viridisTriticum urartu80.4250.9284.97193forward
CNT3026673Setaria viridisPopulus trichocarpa82.9221.0684.42199forward
CNT30103811Setaria viridisOryza rufipogon62.0829.189.26149forward
CNT30578287Setaria viridisOryza barthii65.8329.9889.87158forward

Expression of CNT30675951

Peptides detected in this lncRNA

>peptide 1 (78 aa)
PVVSGLVGTLDWDADVVRLRLRELGELGTKLAQMESGNLLIKVLRKHIHLLLILARALLLPQFKLSNDLFRDDILQGKD

Sequence

>CNT30675951
ACCGGTAGTGAGCGGGCTTGTAGGGACCCTCGATTGGGACGCTGATGTAGTCAGACTGAGACTTCGAGAGCTTGGTGAGCTTGGCACCAAGCTTGCCCAA
ATGGAGAGCGGCAACCTTCTCATCAAGGTGCTTCGGAAGCACATACACCTTCTTCTCATACTTGCCAGAGCTCTTCTCCTTCCACAGTTCAAGCTGAGCA
ATGACCTCTTCAGAGACGACATCCTCCAAGGTAAGGACCT