Detailed information on CNT30675223


BLAST search results

BLAST vs Swiss-Prot:
sp|O49079|PSBO_FRIAG, E-value = 1e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30621504Setaria viridisCajanus cajan84.7815.5579.59245forward

Expression of CNT30675223

Peptides detected in this lncRNA

>peptide 1 (94 aa)
VHFPIHDGRLVRLELRVPDPLDLHILRCLGPKVGVRRLHTLEDTDDLASFRVALGDAQCEAGHELGLLELGRGVLGDALGLDGEGRRLQAELLHL

>peptide 2 (50 aa)
MTSPVSGLLLVTLNVRRVMSLVFWNSGGAFLAMPSALTVKDVGSRQNFFIW

Sequence

>CNT30675223
TAGTACACTTTCCCATCCATGACGGACGTCTAGTTAGACTCGAGCTGCGCGTACCAGATCCCCTGGATCTTCACATCCTTAGGTGCCTTGGCCCCAAGGT
CGGTGTCCGACGGCTGCACACTCTCGAAGACACCGATGACCTCGCCAGTTTCCGGGTTGCTCTTGGTGACGCTCAATGTGAGGCGGGTCATGAGCTTGGT
CTTCTGGAACTCGGGCGGGGCGTTCTTGGCGATGCCCTCGGCCTTGACGGTGAAGGACGTCGGCTCCAGGCAGAACTTCTTCATCTGGT