Detailed information on CNT30673726


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521444Setaria viridisSetaria italica10077.56100394forward
CNT30216754Setaria viridisKalanchoe fedtschenkoi24.6222.0582.4797forward
CNT30596912Setaria viridisOryza meridionalis24.6223.1587.6397forward
CNT30148536Setaria viridisBrachypodium distachyon22.0840.6593.187forward
CNT30577459Setaria viridisOryza barthii24.8719.0385.7198forward

Expression of CNT30673726

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLVPLQHSAASEAEHPSQCSACRRRCPSW*

>peptide 2 (30 aa)
MNESQGVNHKETHPHAGAFTALCSERSRAP*

>peptide 3 (48 aa)
MPAAMPFMVRMSVSSSPGPYSLAGLSFTIPRGWLPSAMVLSPQSHRDL*

Sequence

>CNT30673726
ATTAAATATAACATGCCAATAGTTTGTGGTCTTTATATTATTACAGAATTACAGAATGCTTAAACAGCCAAGAAGTTCCACTTGATCTTTACATCAAGCC
TTATTCGAAAAGAAAACATGAACGAAAGCCAAGGTGTGAATCATAAAGAAACACATCCACATGCTGGTGCCTTTACAGCACTCTGCAGCGAGCGAAGCAG
AGCACCCTAGCCAGTGTTCTGCATGCCGGCGGCGATGCCCTTCATGGTGAGGATGAGCGTGTCCTCCAGCCCCGGCCCGTACTCGCTCGCCGGGTTGAGC
TTCACAATCCCGCGCGGCTGGCTCCCGTCGGCGATGGTCTTGTCACCACAGTCACACAGGGATTTGTAGCACAGCTCAAGGGGCTCCAGGAACT