Detailed information on CNT30671973


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520559Setaria viridisSetaria italica63.4511.12100151forward
CNT30231096Setaria viridisAnanas comosus28.998.3386.9669forward
CNT30363020Setaria viridisSorghum bicolor39.511.3191.4994forward

Expression of CNT30671973

Peptides detected in this lncRNA

>peptide 1 (31 aa)
ESSLSSFSSTLSETRSSNLFSSKLAPPASAS*

>peptide 2 (47 aa)
RVLPLQLLLHPLRDALLQLVLQQARPAGQRQLTFLRSRAEPTVTSTS*

>peptide 3 (75 aa)
TSPPSPASPPPSPRRAPPTCSPASSPRRPAPVDVLEVPGRTDGHLHLVAGPHRLSGRRWQEGQTEGKLVPFALLD*

Sequence

>CNT30671973
ACGAGTCCTCCCTCTCCAGCTTCTCCTCCACCCTCTCCGAGACGCGCTCCTCCAACTTGTTCTCCAGCAAGCTCGCCCCGCCGGCCAGCGCCAGTTGACG
TTCTTGAGGTCCCGGGCCGAACCGACGGTCACCTCCACCTCGTAGCGGGACCCCATCGCCTCTCCGGCCGGCGGTGGCAGGAAGGGCAGACGGAGGGGAA
GCTTGTGCCTTTTGCTTTGCTAGATTAGCGACTGGATG