Detailed information on CNT30671899


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT302442Setaria viridisZea mays39.529.4295.1883forward
CNT30371516Setaria viridisOryza glumipatula25.2412.8388.6853forward
CNT30102715Setaria viridisOryza rufipogon37.145.2191.0378forward
CNT30117170Setaria viridisOryza nivara38.118.3992.580forward

Expression of CNT30671899

Peptides detected in this lncRNA

>peptide 1 (64 aa)
PIFRRHTRLFRFQFSDTTVPSLQRPAFFREVTWGQHPSGHRSAPPPWQTGQSPQDPFPQMGRRR*

>peptide 2 (67 aa)
QSFVAIHVFFDFNFQIQLFPLFKGRPSLGKLLGANILQGTDLLLPHGRLDSHHKILSPRWGGADDKR*

Sequence

>CNT30671899
ACCAATCTTTCGTCGCCATACACGTCTTTTTCGATTTCAATTTTCAGATACAACTGTTCCCTCTCTTCAAAGGCCGGCCTTCTTTAGGGAAGTTACTTGG
GGCCAACATCCTTCAGGGCACAGATCTGCTCCTCCCCCATGGCAGACTGGACAGTCACCACAAGATCCTTTCCCCCAGATGGGGAGGCGCAGATGATAAG
CGATAAGCTC