Detailed information on CNT30671307


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30589619Setaria viridisMusa acuminata31.4626.1789.5567forward
CNT30255676Setaria viridisAvena sativa21.62.393.4846reverse complement
CNT30592895Setaria viridisEragrostis curvula32.3913.2994.269forward

Expression of CNT30671307

Peptides detected in this lncRNA

>peptide 1 (40 aa)
QDEVEERGLVDLDELGVPVLELLSVIIFFSASADAIKSKP*

>peptide 2 (28 aa)
MRLRIGSKGMDMGIWGAAVAWLGLLLLSR

Sequence

>CNT30671307
ACCAGGATGAGGTCGAAGAGCGTGGCCTGGTCGACCTTGACGAACTCGGCGTCCCAGTTCTTGAGCTCCTGAGCGTGATCATCTTCTTCTCGGCCTCGGC
GGACGCCATCAAATCGAAACCCTAGATGCGGCTGCGGATCGGATCCAAGGGGATGGATATGGGGATTTGGGGGGCGGCCGTGGCTTGGCTTGGCTTGTTG
TTGCTTTCCCGTG