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Detailed information on CNT3066951


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9C7S5|PSYR1_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONORUT002669, E-value = 8e-155

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691200Leersia perrieriOryza sativa10.3529.9585.78422forward
CNT30301656Leersia perrieriTriticum aestivum2.728.2184.55110forward
CNT30227115Leersia perrieriHordeum vulgare3.7354.2982.89152reverse complement
CNT30559962Leersia perrieriActinidia chinensis6.0140.979.59245forward
CNT30552618Leersia perrieriOryza glaberrima9.176.3481.4371forward
CNT30441953Leersia perrieriAegilops tauschii5.7174.4482.83233forward
CNT30460927Leersia perrieriSaccharum spontaneum20.8792.481.08851forward
CNT30686777Leersia perrieriTriticum urartu8.5850.884.29350forward
CNT30722486Leersia perrieriTriticum spelta3.2127.0788.55131forward
CNT30109886Leersia perrieriOryza longistaminata1.7229.549070forward
CNT30150273Leersia perrieriBrachypodium distachyon1.8633.4886.8476forward
CNT30575248Leersia perrieriOryza barthii2.5533.6683.65104forward
CNT30603683Leersia perrieriOryza punctata7.0165.7579.72286forward

Expression of CNT3066951

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MRSVSVSLFSSPLPRGIITNKCSGSELNEHASRSPVVLILFLVLGIAALSEKRKCPNSKTIADPPKNTPNTIATMAFLFNCFSDADVSSADLHL*

>peptide 2 (32 aa)
MLAFTLCYQASALAYGLQTFAAILPAPLVYDF*

>peptide 3 (35 aa)
MAYGYSFGLYKNCHRPTAAFFVHCSCMTFARGCLQ*

>peptide 4 (31 aa)
MDYYSRLATQRTLGSHMFHSALFLSLASPSR*

>peptide 5 (38 aa)
MKPIIQATILHIRIYEEPYVSLDAVSPQRHKIVMLCHG*

>peptide 6 (35 aa)
MKVICSLHEISECEFVFFSVASWYHYQQMLWIRVE*

>peptide 7 (55 aa)
MPLKLFLPRSSSTRLVSFTASIASKFPSKSLLGKERHSNEVALNSSPGRVPIILL*

>peptide 8 (48 aa)
MFSTCSGLAGVEYGSLLRSPFRRLKLTSTMMILLEYTNSCGRAPDSRL*

>peptide 9 (43 aa)
MELLQFTELIYRIWNHATEVVPSKIKFNQISEFYCKYSIKVSF*

>peptide 10 (40 aa)
MLIFVKENQFLNQDSTGERVHGNHSKKFPSFGGIISLEIW*

>peptide 11 (90 aa)
MQGLQSTHLQAISSTFSICASYPVPWSVGSRTSSIFPLDLISFTHGTSSFNVERIETGCLPVSSSSRTTPKLYISPLKVATHSCPYSGGM*

>peptide 12 (71 aa)
MVDLFACYLIGTKFDTRIEGCIPLFELENAHICERKSIPKSGFDWRESSWKSLQKVPVIWRNHQSGDLVNK*

>peptide 13 (63 aa)
MEITPKSSRHLEESSVWRFGEQIRLMRWVRELINAGVYFVLSSVRLGLWPPDFCSHSPGSTGV*

>peptide 14 (61 aa)
MRSLMFPWMQYPHKGTRLSCCAMDRASTSAANSLSIRHISPLSFLMASVELFGSSALYTSP*

Sequence

>CNT3066951
TAAAAAAACAGAATGGTAATATGTCATGAGCTGTACAAAACATATTACTAGGTTAGGAAATTACTACATTTAGTCTATGCACTGTTCTACAATTTTGTCG
CTGCGTAACTGGAATTTACCTTAACTGACTTCTATATCTTCAGGTTGGAACCTATACTGTCCAGGCAGGATACTACCTGTGTGATAGTTGGCCGCATGCA
AGGATTACAGTCAACACATTTGCAAGCAATTTCAAGCACCTTCAGCATCTGTGCTTCATACCCTGTGCCTTGGAGTGTTGGATCCAGGACCTCAAGCATA
TTTCCCTTGGACCTCATTTCTTTCACCCACGGAACAAGTTCTTTCAATGTAGAAAGGATTGAAACGGGTTGCCTTCCTGTGAGCAGCTCAAGCAGGACCA
CTCCAAAACTGTACATATCGCCTCTTAAGGTAGCAACCCATTCTTGCCCATACTCAGGTGGGATGTAACCCAGAGTGCCGACTAGCTCAGTTGTGACATG
GTTTTTGTTTGGAAGGATCAATCTTGACAGGCCAAAATCTGCAACATAAGCTTTGAATTCTTTATCAAGTAGGATGTTGCTGGACTTGATGTCACGGTGG
ACAATGTGAGGTTCACAGACATCATGGATATATAAAAGGCCCTGGCTTGCTCCCTGTGCAATCTTCAAACGTGTTGGCCAGTCAAGAAATGATCTGGCTT
CGTCATCCCTGTTATGAAGCCAATCATCCAGGCTACCATTCTCCATATAAGAATATATGAGGAGCCTTATGTTTCCCTGGATGCAGTATCCCCACAAAGG
CACAAGATTGTCATGCTGTGCCATGGATAGAGCTTCAACCTCTGCAGCAAATTCCCTTTCCATCAGGCACATTTCTCCATTGAGCTTCTTGATGGCAAGT
GTGGAGCTATTCGGTAGCTCAGCTTTGTACACTAGTCCATAACCTCCACAGCCTATGATGTGCTCCTTATGAAAGTTATTTGTAGCCTCCATGAGATCAG
TGAGTGTGAGTTTGTTTTCTTCTCCGTTGCCTCGTGGTATCATTACCAACAAATGCTCTGGATCAGAGTTGAATGAACATGCGTCCAGATCTCCAGTAGT
TCTGATTTTGTTTTTGGTTTTGGGAATTGCAGCCCTGAGTGAGAAAAGGAAGTGCCCCAATAGCAAAACAATTGCGGACCCTCCGAAAAACACACCTAAT
ACTATTGCAACAATGGCCTTTTTATTCAATTGTTTCTCGGATGCTGATGTTTCTTCTGCTGATTTGCATTTGTGACTGAGCATAGAGCTACATAGCTTTA
GATTATTATCAAAGCTGGAATTTGGAAATGTACTAAATTGAGTTCCACTGGGAATAGGACCTTCAAGGTCATTGTTTGAAACATTGAATGCTGAAAGGAA
GTTCAGTCTATTCAGTTCACCAGGGATTGCACCTGTGAGGTGGTTACTGGATAAATCTAGAAATTGCAGACGTGTGAGATTGCAAACTGATTGTGGGATT
TGTCCATTTAAGTTGTTGTGGCTGAAATCAAGTACAACAAGCATTTTTAGCATACCAATCTGTTGGGGAATCACACCCGTGAAGTTGTTTTTGCTTATAT
TCAACACTGTCGGGAAAGCATTAAGCACACGGTATTGAAGTGATGGACTACTATAGTAGACTGGCAACTCAAAGAACCTTAGGTTCACATATGTTTCATT
CTGCATTGTTCTTATCATTGGCATCTCCGTCAAGGTGATTGGAATTTCTCCTGTTAGGCTATTGTTTGAAATGTCCATATAGAAGAGGTGGCTTAATGAG
CTAATCCAGCCTGGTATTGGTCCAGCTAGTCGATTGTCTGATAAAACCAGTAACTCCAAGTTTGTGATCCTTGATAGCCAAAGTGGTATTTTTCCAGATA
ATGAGCAGTGACTTATTGAGAGGACTTGGAGATTTTCGAAACCATCAATGGTTTCATCCTGCGGAATGACCTCATCCATGAAGTTGTGTCCAATAAGAAG
GGTGGTAAGGTTCCTGAATCTCTTAAAGATCTGAAGAGCTCTTGTGATATTTGTAAAAGAATTGTTTGTCAGAGATAGGAAAGAGAGGTACTTCAGATTG
CTTATCCCTGATGACAGCTCACCATTGAAATGGTTGCCCGAGAGCCTCAGTGCACTTAAATTGCTACATGAGTAGATGCTTTCTGGAATTATCCCACTGA
AATTGTTCATGTAAAGATCTAAAGTTTTCAGACTGGGTAATGTGGAGAAGTTGACCTTGCCTAGATCTCCACTAAAGCTGTTGCCCTTGAGATCGATGGT
TGTGAGATATTTGCAATTGCCCAAAGCCGATGGAAGCTCACCATACATGTTGTTGTAGTCCAAATGGAGCTCCTGCAATTTACTGAGCTGATCTATAGAA
TTTGGAATCATGCCACTGAAGTTGTTCCTTCCAAGATCAAGTTCAACCAGATTAGTGAGTTTTACTGCAAGTATAGCATCAAAGTTTCCTTCTAAATCAT
TATTGGGAAAAGAGAGGCACTCCAACGAGGTAGCATTAAATAGTTCACCTGGGAGAGTCCCAATAATTTTGTTGTGACCAGCCTTCAGGATTCTGAGCAC
AGAGCAACTCCCAAGTTCAGGGGGAATGCTCCCACTGAATTGGTTGTAACTGAGTTCAAGTACGGAGAAAAATCTTGAATTGGTGCAGAAATTAGTTGGT
ATTTGTCCTGTAAAGCTGTTGTTACTGGCATTGAGTGCGACCAGATTTTTCATAATTTCCCATGTGGAGGATGGAAACTGTCCTGTAAAAAAATTGCTGG
AGATGTTCAGTACCTGCAGTGGCCTGGCAGGGGTGGAATATGGCAGCTTGTTGAGATCTCCATTCAGACGGTTAAAGCTCACATCAACAATGATGATACT
GCTGGAATACACCAATTCCTGTGGTAGGGCACCAGATAGCAGATTATGAGACAGGTTGAGGCTCAGCAATCCAGTCAGGTTGCCAAGAGATGGTGAGATG
TGGCCCTGAAGGTTCCTAGAAGCCAGCGAAACATCTGTCACGGTCCTATCTGGGCTGCAGGTGATCCCTTCCCAGTTGCAACAATCTGTGTCATCCTGCC
ATGACATACTGAGGTCTCCATCCTGAGAAAGCTCTGTGAGGAACTTGAGGAGAGAGCTCTTCTCCTGCTCTGTACATGAACTGGTCAGAGAGGCGATGTT
GAGCAGCAGCACAAGGGCAAGACTAAGAACAGGCATGCTTAGTCTGTTGCTATGTTTCTTGTATGAAGAATGAAGTGGATGCATGATTTTCTGGTGAAAC
TAGCATGGAGGTCTGATGCTAAGTTTGTATCCTGACTGGGGAAAACATCAGATGGTGTAGTGTATCAAGAAAGAGCACCAGGAGGAAGAAAGAAGCAGTT
CGTCTTTTGGCCTTCTACCCATAGTCGTAAAAAATTAAATGCTATGGCCTACGGATACTCATTTGGACTTTACAAAAACTGTCACAGGCCCACAGCTGCT
TTCTTTGTTCATTGTTCATGCATGACGTTCGCTAGAGGCTGCCTACAATAATCTATCGGAAAGTCCAAGTTTTTATCTTAAATCCTGACCATACAAGTTA
TTTTCTTCCACGATTCACCATGGTGGACCTTTTTGCTTGCTATTTAATTGGGACAAAGTTTGACACAAGGATTGAAGGATGCATCCCTTTGTTTGAACTG
GAAAATGCTCATATTTGTGAAAGAAAATCAATTCCTAAATCAGGATTCGACTGGCGAGAGAGTTCATGGAAATCACTCCAAAAAGTTCCCGTCATTTGGA
GGAATCATCAGTCTGGAGATTTGGTGAACAAATAAGGCTCATGAGGTGGGTGCGCGAGCTGATTAATGCTGGCGTTTACTTTGTGTTATCAAGCGTCCGC
CTTGGCTTATGGCCTCCAGACTTTTGCAGCCATTCTCCCGGCTCCACTGGTGTATGATTTTTGACCATGGACTATGACACCATCTGAATCTTGGAAATGC
TTGAAGTCAGCTGGCTGATCACTTGCAGTTGTGTCATGTGTAGACATGGTCTATGGATTGGAATGGAGCCACAAAGAG