« Back to Triticum dicoccoides search


Detailed information on CNT30669382


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673796Triticum dicoccoidesSetaria viridis22.3258.5996.24133forward
CNT30513024Triticum dicoccoidesJuglans regia22.3217.8586.47133forward
CNT30371693Triticum dicoccoidesArabidopsis thaliana19.9721.9284.03119forward
CNT30306600Triticum dicoccoidesTriticum aestivum20.8139.12100124forward
CNT3085000Triticum dicoccoidesVigna radiata40.68.6286.78242forward
CNT30554195Triticum dicoccoidesOryza glaberrima40.17.8496.23239forward
CNT30254428Triticum dicoccoidesAvena sativa38.2642.4698.25228forward
CNT3060118Triticum dicoccoidesArabidopsis lyrata19.9740.4885.71119forward
CNT30141866Triticum dicoccoidesLolium perenne39.0938.3297.42233forward
CNT30347540Triticum dicoccoidesEragrostis tef41.6120.9695.16248forward
CNT30368840Triticum dicoccoidesSorghum bicolor34.7357.6695.65207forward
CNT30370517Triticum dicoccoidesOryza glumipatula37.9245.2995.58226forward
CNT30571602Triticum dicoccoidesVitis vinifera26.6814.4287.42159forward
CNT30705067Triticum dicoccoidesPrunus avium36.5822.3684.4218forward
CNT30644153Triticum dicoccoidesCannabis sativa26.3422.4379.62157forward
CNT30116955Triticum dicoccoidesOryza nivara40.130.2996.23239forward
CNT30111719Triticum dicoccoidesFicus carica27.0117.8187.58161forward

Expression of CNT30669382

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MAFFTLSFCSFSSFSHLRACRCSDLDVNLRSKICAISFSGLPIAAAAAVCWLGFRRGSGSGDRGLGMGTREDWGFF*

Sequence

>CNT30669382
CGGGCAAGTAGTATTATATCACTCGTTCGTGTATGAGGGAGGGGCGAGGCTATCTGAATAATAATCACCTGAAGTGAAGCGAAGGCCGTTCAGTTTAGCC
GCGGGCCTTGAGCTCTGCGAGGCGGCGGGTGAGGTCGTCCTCGTCGACCTTCTCCTTGTCCTTGGCGGCCGGGATGGCGTGGGCGGCGGCCTGGGGGAGG
CCGACGGAGACCTCGAGGCGCGCGACGACGGCGTCGAGGCGGGAGGCGAGGCGGAGGTAGTTCATGTGCTCGGTGCGCTTGCGGATGGCGTTCTCGGCGT
AGATCCGCGCGCCGTCGACGTTGCCCTTCTCGATGGCCTTCTTCACCTTGAGCTTCTGCTCCTTCTCCTCCTTCTCGCACTTGCGCGCCTGCCGCTGCAG
CGACTTGGACGTGAACTTGAGGTCGAAGATCTGCGCCATCAGCTTCTCCGGGTTGCCCATTGCCGCCGCCGCCGCGGTTTGCTGGCTAGGGTTTCGTCGG
GGGTCGGGGTCGGGAGATCGGGGATTGGGGATGGGGACGAGAGAGGATTGGGGATTTTTTTAGGGGAGGGGAGGCCGACGCGGTGGTTTGATTCGG