Detailed information on CNT30669134


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184327Triticum dicoccoidesSecale cereale17.6175.5995.65161forward
CNT30304883Triticum dicoccoidesTriticum aestivum95.9580.9100877forward
CNT30459409Triticum dicoccoidesSaccharum spontaneum15.5440.1186.62142forward

Expression of CNT30669134

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MGRLRPRGIHVLRRRLSWRFVTAVVNQHKRWHA*

>peptide 2 (39 aa)
MGHHNRDFLASCAVAVSSLLTPFARPQCEIGNLVRVLVD*

>peptide 3 (36 aa)
MVVSTGRTIMCLREPPIDAPCEVMLTFSFLFGKVME*

>peptide 4 (42 aa)
ECLVSGASGRLRRGFELLHVVAPSMRRQLHYLQGSYKIYGSS*

>peptide 5 (45 aa)
MARLGAEGLARSRWIVGAAISLATLRGFVKVDGEPLQGDVVAFFF*

>peptide 6 (39 aa)
MALMGRCLRGADGEVETSWNPCSQAEAKLAICHCSCESA*

Sequence

>CNT30669134
GGGAATGCTTGGTCTCGGGCGCGTCTGGCCGCCTGCGCCGAGGGTTTGAGTTATTGCATGTGGTGGCACCAAGCATGAGGCGACAACTGCATTACTTGCA
AGGAAGTTACAAAATCTATGGGTCATCATAATCGTGACTTTCTTGCAAGTTGTGCAGTTGCTGTCTCAAGCTTGCTGACTCCGTTTGCCAGACCGCAATG
TGAAATAGGAAATTTAGTCAGGGTACTAGTGGATTAAGGATACAAGAGTGCATCCTAAGTTGCAATGGTTGTATCCACGGGAAGAACAATTATGTGTCTA
CGAGAACCTCCAATTGATGCACCATGTGAAGTCATGTTGACATTTTCTTTTCTCTTTGGTAAGGTTATGGAATAAATTTTATTTTCCCTAGTATTGTGTT
AGTGGTGTATATATTCACTAAACAAGGTTCTTCCATTCCTCTGTTTCCATATGCCGCTGCACCATCATCCACTGCCATGCTGAGGTGGTGGAGATTAGCA
GGCAGCAGTCTTAATGGCGTTGATGGGGAGGTGTCTTCGCGGTGCTGATGGGGAGGTTGAGACCTCGTGGAATCCATGTTCTCAGGCGGAGGCTAAGTTG
GCGATTTGTCACTGCAGTTGTGAATCAGCATAAGAGATGGCACGCTTAGGTGCCGAGGGCCTCGCTAGATCCAGATGGATTGTAGGAGCCGCAATCTCGC
TCGCCACTCTGCGGGGGTTTGTCAAGGTTGATGGCGAGCCTCTACAGGGTGATGTAGTGGCTTTTTTTTTTTGAAAAAACTCAGACTTTATTCATTTGTA
ATAAGTAATACATCGTTTGTGAGGATCATTACAATTTCATTTAAGGGCTCCTCAAACCAATCGGAAGTCAAAGAAAATCTAGCTGGAAATCAGGGTGAAT
GGGTGATGTAGTGG