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Detailed information on CNT30668396


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 2e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30442558Triticum dicoccoidesAegilops tauschii90.3388.7896.57467forward
CNT30596694Triticum dicoccoidesOryza meridionalis47.9729.4984.68248forward

Expression of CNT30668396

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPLAAVDDSGSATRDAAMGAAGAAGQMEKGKRRLLSTVAIAAERRASLGGTTP*

>peptide 2 (49 aa)
MPPWAPQGRRGRWRRASGGCSVRWPSRRSGELAWEVLLRRQIARRDTRG*

>peptide 3 (64 aa)
MTRSEVGYAAQVSTHPASIWSSSRKLWSDWSRRGRSRAGRSLPPRRGRGCRRRRGPRGPPRPPA*

Sequence

>CNT30668396
GTGGAAACGGGTCGAACTAAACAAAATCAGTGAATTCAAGCGGTGAGCTCCTCCTCCTTGTGGGTCTCGATGACGAGGTCCGAGGTGGGGTACGCGGCGC
AGGTGAGCACCCACCCCGCCTCGATCTGGTCGTCGTCGAGGAAGCTCTGGTCGGACTGGAGCCGGCGCGGCAGGAGTAGGGCAGGTCGATCCCTTCCTCC
TCGGCGTGGTCGAGGATGTAGACGTCGTCGGGGACCTCGAGGTCCACCTCGCCCTCCGGCGTGATCAGCTTCACCTTGTACGTCGCCTGCGCGCGGAGCC
TCATGCCCCTGGCGGCCGTCGACGACAGCGGGAGCGCGACGCGGGATGCCGCCATGGGCGCCGCAGGGGCGGCGGGGCAGATGGAGAAGGGCAAGCGGAG
GCTGCTCAGTACGGTGGCCATCGCGGCGGAGCGGCGAGCTAGCTTGGGAGGTACTACTCCGTAGACAGATAGCTCGACGAGACACGAGAGGATAGTGTTG
GAGCTTGTGAGCTGAGA