Detailed information on CNT30668156


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30305219Triticum dicoccoidesTriticum aestivum92.641001001283forward
CNT30226134Triticum dicoccoidesHordeum vulgare24.428.6292.01338forward
CNT30443837Triticum dicoccoidesAegilops tauschii78.84101.3993.961092forward
CNT30688313Triticum dicoccoidesTriticum urartu44.1965.0497.71612forward

Expression of CNT30668156

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVVSTGRTIMCLREPPIDAPCEVMLTFSFLFGKVME*

>peptide 2 (33 aa)
MGRLRPRGIHVLRRRLSWRFVTAVVNQHKRWHA*

>peptide 3 (45 aa)
MARLGAEGLARSRWIVGAAISLATLRGFVKVDGEPLQGDVVAFFF*

>peptide 4 (43 aa)
KSAILYPRLLFPSPLSPPPSLRLFPRRKTNSMLQQHATSYSPL*

>peptide 5 (92 aa)
NLPFCTHDYSFPLPSRLRLPSDFSLAEKPIPCSSSTQPPILHYSIAPARVPAASMESAAVCRSFTSRLLGPPRLPQPGMLGLGRVWPPAPRV*

>peptide 6 (68 aa)
ICHSVPTTTLSLSPLASAFPPTFPSPKNQFHAPAARNLLFSIIVLLPLGFQPPPWNPRPSADPSPAAF*

>peptide 7 (40 aa)
MGHHNRDFLASCAVAVSSLLTPFARPQCEIGNLVRTCFQM*

>peptide 8 (39 aa)
MALMGRCLRGADGEVETSWNPCSQAEAKLAICHCSCESA*

Sequence

>CNT30668156
AAATCTGCCATTCTGTACCCACGACTACTCTTTCCCTCTCCCCTCTCGCCTCCGCCTTCCCTCCGACTTTTCCCTCGCCGAAAAACCAATTCCATGCTCC
AGCAGCACGCAACCTCCTATTCTCCATTATAGTATTGCTCCCGCTAGGGTTCCAGCCGCCTCCATGGAATCCGCGGCCGTCTGCAGATCCTTCACCAGCC
GCCTTTTAGGTCCGCCTCGCCTCCCGCAGCCGGGAATGCTTGGTCTCGGGCGCGTCTGGCCGCCTGCGCCGAGGGTTTGAGTTATTGCATGTGGTGGCAC
CAAGCATGAGGCGACAACTGCATTACTTGCAAGGAAGTTACAAAATCTATGGGTCATCATAATCGTGACTTTCTTGCAAGTTGTGCAGTTGCTGTCTCAA
GCTTGCTGACTCCGTTTGCCAGACCGCAATGTGAAATAGGAAATTTAGTCAGAACTTGTTTCCAGATGTAAAACTTTAATCGGATATCTCTATACTTAAA
AGGGTACTAGTGGATTAAGGATACAAGAGTGCATCCTAAGTTGCAATGGTTGTATCCACGGGAAGAACAATTATGTGTCTACGAGAACCTCCAATTGATG
CACCATGTGAAGTCATGTTGACATTTTCTTTTCTCTTTGGTAAGGTTATGGAATAAATTTTATTTTCCCTAGTATTGTGTTAGTGGTGTATATATTCACT
AAACAAGGTTCTTCCATTCCTCTGTTTCCATATGCCGCTGCACCATCATCCACTGCCATGCTGAGGTGGTGGAGATTAGCAGGCAGCAGTCTTAATGGCG
TTGATGGGGAGGTGTCTTCGCGGTGCTGATGGGGAGGTTGAGACCTCGTGGAATCCATGTTCTCAGGCGGAGGCTAAGTTGGCGATTTGTCACTGCAGTT
GTGAATCAGCATAAGAGATGGCACGCTTAGGTGCCGAGGGCCTCGCTAGATCCAGATGGATTGTAGGAGCCGCAATCTCGCTCGCCACTCTGCGGGGGTT
TGTCAAGGTTGATGGCGAGCCTCTACAGGGTGATGTAGTGGCTTTTTTTTTTTGAAAAAACTCAGACTTTATTCATTTGTAATAAGTAATACATCGTTTG
TGAGGATCATTACAATTTCATTTAAGGGCTCCTCAAACCAATCGGAAGTCAAAGAAAATCTAGCTGGAAATCAGGGTGAATGGGTGATGTAGTGGCTAGT
CTGGATGAATAGGCAGAGGAAAGGCTGACGGGACGAAATGACCCTCCTTACTTGATCAGGTTATGTATGGTGTTCCTGGTGGTGGAGTTGGGCACAGTCT
GAAACCGTCACATGGAAGAAGTATGGTTGTGGTGGGGTAATGACATGTTTAGCCCGACGAGCAGCCGAATGGGGAAGGACGTGGC