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Detailed information on CNT30666984


BLAST search results

BLAST vs Swiss-Prot:
sp|A3F5L3|DES2_SORBI, E-value = 6e-160

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694665Triticum dicoccoidesOryza sativa18.3350.8686.52178forward
CNT30670880Triticum dicoccoidesSetaria viridis15.8671.9698.05154forward
CNT30518041Triticum dicoccoidesJuglans regia11.5320.5584.82112forward
CNT30375708Triticum dicoccoidesArabidopsis thaliana26.0622.5178.66253forward
CNT30617758Triticum dicoccoidesSesamum indicum5.7724.3589.2956forward
CNT3021318Triticum dicoccoidesCitrullus lanatus19.6721.6180.63191forward
CNT30304072Triticum dicoccoidesTriticum aestivum83.0173.7496.65806forward
CNT30225510Triticum dicoccoidesHordeum vulgare30.6910095.64298forward
CNT30395404Triticum dicoccoidesTriticum turgidum36.77100100357forward
CNT30559187Triticum dicoccoidesActinidia chinensis20.642.3783.5200forward
CNT30589659Triticum dicoccoidesMusa acuminata13.3945.1491.54130forward
CNT30539975Triticum dicoccoidesBrassica napus21.7326.3480.09211forward
CNT30442203Triticum dicoccoidesAegilops tauschii97.3285.8396.83945forward
CNT30254552Triticum dicoccoidesAvena sativa17.437.8993.49169forward
CNT3075396Triticum dicoccoidesBrassica juncea17.9238.1679.89174forward
CNT30139418Triticum dicoccoidesLolium perenne50.6744.0189.84492forward
CNT30650498Triticum dicoccoidesRosa chinensis13.5923.482.58132forward
CNT30717698Triticum dicoccoidesMalus domestica golden13.1820.7581.25128forward
CNT30364958Triticum dicoccoidesSorghum bicolor50.8842.7386.84494forward
CNT30323777Triticum dicoccoidesAsparagus officinalis8.4422.2284.1582forward
CNT30575207Triticum dicoccoidesOryza barthii40.6834.889.62395forward
CNT30583774Triticum dicoccoidesEchinochloa crusgalli57.4732.6986.56558forward

Expression of CNT30666984

Peptides detected in this lncRNA

>peptide 1 (33 aa)
RQRRVGVLQVVLAEDGLDRLGGLHGVVVRHGGE*

>peptide 2 (71 aa)
MTQTPVMDHVGEGLDDGALEAVRRDCLLDLTQRERRLVRRRALVGCPAVGAAELLLLLPLLLRHPAAGTHDA

Sequence

>CNT30666984
CGGCAGCGCCGGGTGGGTGTGCTGCAGGTAGTACTCGCCGAGGATGGGCTTGATCGCCTTGGTGGCCTCCATGGCGTGGTAGTGCGGCATGGTGGAGAAT
AGGTGGTGCGCCACGTGCGTGTCCGTGATGTTGTGGAACACGCGGTTGAGGATGCCGTAGTCGCGGTCCATGGTGGCCAGCGCCCCCCGCAGCCAGTCCC
ACTCCGTCGAGTCGTAGTGCGGCAGCGCCGGGTGGGTGTGCTGCAGGTAGGTGATCAGGACCAGCCAAGCGTTCACGATCAGCAGCGGCACGCCGTAGAC
CCGCACCACCCACCAGAACCCGAACGACGACACGAGCTTCAGCAGAGCCAATGACACGGCCAGCACTCCGACGTCTGAGATGAAAATCTGGGCTCGCTCC
CGGTCGTTGTAGATCGGGCCGTAGGGGTCGAAGTGGCAGGCGAACCGCGGGTACGGGCGGCCTGAGGCGTTGAGCGCCAGGTACAGCGGCCACCCGAGGG
TGAGCTGCACGACGATGTGCACCAGACGGCCGACGGGGTTGTTGTAGATGTAAGGGGTGTACCACGCCAGCGCCTCCTTCTGCTTGGGGACGAACACCTC
ATCGCGCTCCAGCGACCCGGTGTTAGAGTGGTGGCGACGGTGGCTGTACTTCCACGAGAAGTAGGGGACGAGCAGCCACGAGTGGAGCACCAGGCCGACG
GTGTCATCGAGCAGCGAGTAGTCGGAGAAGGCGTGATGGCCGCACTCGTGCGCGATGACCCAGACGCCGGTCATGGACCACGTAGGAGAAGGACTTGATG
ATGGAGCGCTGGAAGCAGTGAGGCGGGATTGCCTTCTTGATCTGACCCAGCGTGAACGGCGGCTTGTCCGTCGGCGAGCGCTGGTAGGCTGCCCCGCCGT
TGGCGCGGCCGAGCTGCTCCTGCTTCTCCCGCTCCTTCTCCGTCATCCTGCCGCCGGCACCCATGATGCTG