Detailed information on CNT30665660


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 2e-93

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30393445Triticum dicoccoidesTriticum turgidum9786.8597.65680forward
CNT30142773Triticum dicoccoidesLolium perenne72.0454.4888.32505forward
CNT30685516Triticum dicoccoidesTriticum urartu9764.8996.47680forward
CNT30498755Triticum dicoccoidesDigitaria exilis32.6740.1189.96229forward
CNT30116740Triticum dicoccoidesOryza nivara66.3354.3288.6465forward

Expression of CNT30665660

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MMSRPPSEKIWAPALNHTASPNLMPFLDRISGNTHPRAPSIAHREWITSSSRFLAKVSGSADNPAVSHP*

>peptide 2 (69 aa)
HDSSVHSLVHTLCLINLHCAQLARGPLARSITVQIKTQSTCSYTLIHDVQVHMHISSDGRTDGRMAKHI*

>peptide 3 (43 aa)
MACTKKPNMENMARRPFLSSFTLSSAAVSGSSARPSGSKAPPG*

Sequence

>CNT30665660
CACACGATTCTTCCGTCCATTCCCTCGTGCACACCTTGTGCTTAATTAATTTACATTGCGCACAGCTAGCGAGAGGACCTCTCGCTCGCTCGATCACGGT
ACAAATAAAAACACAAAGTACGTGCAGCTACACGTTGATCCACGACGTACAAGTACACATGCATATCTCGTCCGATGGACGGACGGACGGACGGATGGCT
AAACACATTTAGCTTCCGGGGGCGAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACTGGGTCGGCGACGTGGTCGAAGAGGTTCTCAACGGGTCCCT
TTCCGGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTCACCTTGAGCTCGGCGGCGGTGTCGGG
GTCGTCGGCGAGGCCAAGTGGGTCGAAGGCGCCGCCCGGGTAGATGATGTCGAGGCCGCCCTCGGAGAAGATCTGGGCGCCGGCCTTGAACCACACGGCC
TCGCCGAACTTGATGCCGTTCTTGGACAGGATCTCCGGGAACACGCACCCCAGGGCGCCGAGCATCGCCCACCGTGAGTGGATCACCTCCAGCTCCCGGT
TCTTGGCGAAGGTCTCTGGGTCAGCCGACAATCCGGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCGCCGGTCAGGTACTTGGGACGGTCAGGGCCGTA
C