« Back to Triticum dicoccoides search


Detailed information on CNT30665641


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 5e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695265Triticum dicoccoidesOryza sativa49.0853.9792.51374forward
CNT30299761Triticum dicoccoidesTriticum aestivum51.05100100389forward
CNT30395284Triticum dicoccoidesTriticum turgidum68.7776.16100524forward
CNT30596768Triticum dicoccoidesOryza meridionalis50.1348.7989.53382forward
CNT30579413Triticum dicoccoidesEchinochloa crusgalli5041.0691.34381forward

Expression of CNT30665641

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

>peptide 2 (34 aa)
MAMAVALQARWFLAREEMGGGAEATRARGRWGCVW

Sequence

>CNT30665641
TTACCATGTACATATAACCTGATGCATCATTATCACCGATCGAATCCATCATTCAAACTCGACAATTAAAATTACAGGACGTCCATCATCATCGCCACCC
GCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGACCTCGATGGGGC
TGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGTACTGCAC
CTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGGCGGTTGGGCCCCTCGCGCATGATGGCGGCGCCGCCAGTGGGC
ATCTCGAAGACCTGCTCCTTGGGGGAGGTCCAGGTGATGACGTAGAACTCCTCGACCTGGGCCTTGCGGAGGAGGCCGCCCGTGCTGCCGCCGAAGATCG
GGGACGGGGTGGACGGGTCCAGCTGCGGCGGCACGAAGCCCGCGGGGGCGGGCTCCGCCGGCGGCGCCGCTGGGGCGGGGGTGTCCGAGGCCGCGGCGCA
GAGCGGGGCCGGGCCGCGGTGATCAGGTGGCGCGTCGCCGCCGAGGCTTGCGTGGCCATGGCCATGGCGGTGGCGCTCCAAGCTCGGTGGTTCTTGGCGA
GAGAGGAGATGGGGGGAGGAGCCGAGGCCACACGCGCGCGCGGGAGATGGGGTTGTGTCTGG