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Detailed information on CNT30665054


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6YZA6|GL85_ORYSJ, E-value = 8e-118

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30401458Triticum dicoccoidesTriticum turgidum45.6696.9791.93384forward
CNT30240671Triticum dicoccoidesAvena sativa50.6554.5580.99426forward
CNT30102982Triticum dicoccoidesOryza rufipogon18.195182.35153forward

Expression of CNT30665054

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MSPTGKTNTSPLLSTLEKNLFLLGAGWLDVTKPTYSVPSSTVRISVARGCVCGGFWPKGA*

>peptide 2 (33 aa)
MLHLFYRLGCISRNSTMSFACALVFRLINKGLT*

>peptide 3 (72 aa)
MRAIDMPRVFSPAICMTLIKVTLDPTLLGTLGLSRLAALKKSSALTSIGFLQTNPLTRTGGKRDVHVSSDFTL

Sequence

>CNT30665054
GATAAATACGACACATCAGATTCCAAAAGAAGCAAATGAGATCATATTAGTGTGATAAATACAATATTGTCAATTATTCAGAAGGTAGAAATACATTCAC
TGATTACAGACACACAATGGCATGACATATGCTCCATTTATTTTATAGATTAGGATGCATATCTAGGAACTCAACCATGTCCTTCGCTTGTGCACTGGTC
TTCCGGCTAATTAACAAAGGTCTGACTTAGTAGTGGTTGTTCTCCCAGAACTGAGCCTGGAGATAGTCAATTGTATTCTTTTCCACCTGAAATGCCTTGG
CAAGAACATCATCTGATATTGGTGGGTCTGACCCAAACACTGCATTGGCAATTGTGATAGCCCCTGGGTTCTGGCTGCTTAGCGCGGCAATTGCAACAGC
GGGCTGGTGGGGGTTGGGGTTGAATTGGAAGTGGATGAGCCCCACGGGGAAGACAAACACATCACCTTTGTTGAGCACCTTGGAGAAGAACTTGTTTTTG
TTGGGGGCGGGCTGGTTGGATGTCACAAAGCCAACGTACAGTGTTCCCTCGAGCACCGTGAGGATCTCAGTGGCGCGAGGGTGCGTATGTGGTGGGTTTT
GGCCCAAGGGAGCATAGTCGATGCGCGCAATTGATATGCCGAGGGTGTTCAGTCCAGCAATCTGCATGACGTTGATCAAAGTGACGTTGGATCCAACCTT
GTTGGGCACCCTAGGCTTGTCGAGGTTGGCCGCCTTGAAGAAGTCATCTGCATTGACCTCCATCGGGTTCTTGCAAACAAACCCATTGACACGGACTGGG
GGCAAAAGAGATGTACATGTAAGCTCAGATTTTACATTGTT