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Detailed information on CNT30664930


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 6e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30122581Triticum dicoccoidesPhyscomitrium patens20.879.586.5767forward
CNT302080Triticum dicoccoidesZea mays69.1651.8787.39222forward
CNT30358694Triticum dicoccoidesLactuca sativa38.3227.6484.55123forward
CNT30117448Triticum dicoccoidesOryza nivara69.7833.1988.84224forward
CNT30558912Triticum dicoccoidesPanicum hallii21.1826.4697.0668forward

Expression of CNT30664930

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MSKEFLPVNLTSMGLTFLPMLRKRLRRLGPSRMMAAPPVGISNTCSLGEVQVMT*

Sequence

>CNT30664930
CTCGACAATTAAAATTACAGGACGTCCATCATCATCGCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAG
ATGTCGAAGGAGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGCGCTTGAGGAGGTTGGGGCCCTCGCGCATGA
TGGCGGCGCCGCCGGTGGGCATCTCGAACACCTGCTCCTTGGGGGAGGTCCAGGTGATGACGTAGAACTCCTCGACCTGGGCCTTGCGGAGCAGGCCGCC
CGTGCTGCCGCCGAAGATCGG