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Detailed information on CNT30664266


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 2e-18

BLAST vs NONCODE:
NONORUT000582, E-value = 1e-58

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508435Triticum dicoccoidesSolanum lycopersicum38.566.484.55123reverse complement
CNT30203049Triticum dicoccoidesHelianthus annuus66.1479.9297.16211forward

Expression of CNT30664266

Peptides detected in this lncRNA

>peptide 1 (49 aa)
WPGIEKEGRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

Sequence

>CNT30664266
TGGCCTGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAA
GCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAG
CGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCA
AGCGTAGTTAGAAAAGTTA