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Detailed information on CNT30663243


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40073|RCAA_HORVU, E-value = 1e-51

BLAST vs NONCODE:
NONBRAT002426, E-value = 4e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3074780Triticum dicoccoidesBrassica juncea79.6964.286.54208forward
CNT30218871Triticum dicoccoidesKalanchoe fedtschenkoi77.3946.4484.16202forward
CNT30213268Triticum dicoccoidesHelianthus annuus75.4810.6986.29197forward
CNT30150829Triticum dicoccoidesBrachypodium distachyon91.9550.8595.42240forward
CNT3039667Triticum dicoccoidesMarchantia polymorpha52.8761.0684.06138forward

Expression of CNT30663243

Peptides detected in this lncRNA

>peptide 1 (86 aa)
RWIVLGSCTLVGASAMFMRVAFTIWLLTVYCVVPPIRPAPASRSLMKRQHILPFLIMSAASRYRCLMSLAGSPALPLSSSPALIMIG

>peptide 2 (85 aa)
MDCPGKLHVGGGIGDVHEGGVHHLVVDGVLCGPAHPTRTSVKIVDEEAAHLTLLDHVCSLTVPLPDELGWLSGVATLQLSGTHHDW

Sequence

>CNT30663243
CGATGGATTGTCCTGGGAAGCTGCACGTTGGTGGGGGCATCGGCGATGTTCATGAGGGTGGCGTTCACCATCTGGTTGTTGACGGTGTACTGTGTGGTCC
CGCCCATCCGACCCGCACCAGCGTCAAGATCGTTGATGAAGAGGCAGCACATCTTACCCTTCTTGATCATGTCTGCAGCCTCACGGTACCGCTGCCTGAT
GAGCTTGGCTGGCTCTCCGGCGTTGCCACTCTCCAGCTCTCCGGCACTCATCATGATTGGG