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Detailed information on CNT30663145


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40073|RCAA_HORVU, E-value = 8e-67

BLAST vs NONCODE:
NONBRAT002426, E-value = 1e-71

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30282863Triticum dicoccoidesChenopodium quinoa54.4713.3886.33256forward
CNT30727557Triticum dicoccoidesCorchorus capsularis48.9455.1686.09230forward
CNT30628493Triticum dicoccoidesVigna unguiculata42.9825.2587.62202forward
CNT30185579Triticum dicoccoidesSecale cereale53.1965.4598.4250forward
CNT30295268Triticum dicoccoidesTriticum aestivum61.771.25100290forward
CNT30223071Triticum dicoccoidesHordeum vulgare57.4536.1995.56270forward
CNT30564971Triticum dicoccoidesActinidia chinensis20.2132.9991.5895forward
CNT30144634Triticum dicoccoidesMedicago truncatula49.1558.6386.58231forward
CNT30439608Triticum dicoccoidesAegilops tauschii65.5325.6798.7308forward
CNT30310249Triticum dicoccoidesCamelina sativa22.1346.2287.5104forward
CNT30469250Triticum dicoccoidesSaccharum spontaneum27.4521.9486.82129forward
CNT30136831Triticum dicoccoidesLolium perenne24.6822.4887.07116forward
CNT30609928Triticum dicoccoidesGossypium raimondii50.2151.8786.44236forward
CNT30233037Triticum dicoccoidesAnanas comosus42.3465.8985.93199forward
CNT30213184Triticum dicoccoidesHelianthus annuus47.6612.1186.16224forward
CNT30365435Triticum dicoccoidesSorghum bicolor27.4516.8286.82129forward
CNT30355370Triticum dicoccoidesLactuca sativa48.0962.4386.73226forward
CNT30642662Triticum dicoccoidesCannabis sativa52.1347.7688.16245forward
CNT3034456Triticum dicoccoidesTheobroma cacao34.0474.4289.38160forward
CNT30326483Triticum dicoccoidesAsparagus officinalis20.649.9889.6997forward
CNT30120246Triticum dicoccoidesCitrus clementina51.4962.0583.88242forward
CNT3038844Triticum dicoccoidesCucumis melo44.0428.8386.96207forward
CNT30578322Triticum dicoccoidesOryza barthii27.4562.6290.7129forward
CNT30498436Triticum dicoccoidesDigitaria exilis23.6222.8490.99111forward
CNT30604727Triticum dicoccoidesOryza punctata30.4353.5688.81143forward

Expression of CNT30663145

Peptides detected in this lncRNA

>peptide 1 (54 aa)
DGLSWEGVDDLDDGLVADIVGLEDTLADTDTVVAGGSPVELLHTTITDERGVQR*

>peptide 2 (38 aa)
MDCPGKVSTILTTDSSLTLSVWKIPLQTPIRSSRVGAQ*

>peptide 3 (90 aa)
MRGAYNVEKSLPVTTMGTRGFSSLLYMPGSCTLVGASAMFMRVAFTIWLLTVYCVELRTASWVPSPVGAWKRESTMPFPLVMSCWSSEIS*

Sequence

>CNT30663145
CGATGGATTGTCCTGGGAAGGTGTCGACGATCTTGACGACGGACTCGTCGCTGACATTGTCGGTCTGGAAGATACCCTTGCAGACACCGATACGGTCGTC
GCGGGTGGGAGCCCAGTAGAACTTCTCCATACGACCATCACGGATGAGAGGGGCGTACAACGTTGAGAAATCGTTACCAGTGACGACGATGGGCACACGA
GGGTTCTCCTCCTTGTTGTACATGCCTGGGAGCTGCACGTTGGTGGGGGCATCGGCGATGTTCATGAGGGTGGCGTTCACCATCTGGTTGTTGACGGTGT
ACTGTGTGGAGCTGAGGACGGCCTCGTGGGTGCCGTCGCCCGTGGGCGCCTGGAAGAGGGAGTCCACGATGCCCTTCCCTCTGGTGATGTCCTGCTGGTC
GTCGGAGATATCGTAGGCAAGACCCTTCCACTTGTCTGTGTTCCTCTTCTCGTCGATGTTTTCCGCTGCC