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Detailed information on CNT30659451


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XLR1|PIP26_ORYSJ, E-value = 2e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691396Triticum dicoccoidesOryza sativa48.4723.4290.23174forward
CNT30640614Triticum dicoccoidesNymphaea colorata28.4116.0488.24102forward
CNT30531266Triticum dicoccoidesEucalyptus grandis53.7645.6382.38193forward
CNT30548370Triticum dicoccoidesIpomoea triloba14.7622.7588.6853forward
CNT30180948Triticum dicoccoidesSecale cereale32.595.7197.44117forward
CNT30289517Triticum dicoccoidesTriticum aestivum84.1254.61100302forward
CNT30387764Triticum dicoccoidesTriticum turgidum10040.47100359forward
CNT30589490Triticum dicoccoidesMusa acuminata28.4135.1792.16102forward
CNT3084566Triticum dicoccoidesVigna radiata30.3618.5191.74109forward
CNT30227873Triticum dicoccoidesAnanas comosus31.4818.3785.84113forward
CNT30129030Triticum dicoccoidesCorymbia citriodora22.2813.5692.580forward
CNT30362596Triticum dicoccoidesSorghum bicolor32.5919.891.45117forward
CNT30355349Triticum dicoccoidesLactuca sativa23.41488.184forward
CNT30118191Triticum dicoccoidesCitrus clementina24.518.4784.0988forward
CNT30148068Triticum dicoccoidesBrachypodium distachyon32.5920.2191.45117forward
CNT30102464Triticum dicoccoidesOryza rufipogon28.694.0592.23103forward
CNT30116634Triticum dicoccoidesOryza nivara47.9181.986.63172forward

Expression of CNT30659451

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MTAAPRLLAGLMPVPVMGMVARCTMKTANPMGSGASTGTWESRALRLGSVAEKTVYTSTKVTAGLMWPPEMPAVQ*

>peptide 2 (61 aa)
VVVPCGLLVVDDCGAEAPGGVDAGAGDGDGGEVHHEDGEPDGERGQHGDVGVAGAALGVGG*

Sequence

>CNT30659451
GTGGTTGTCCCATGCGGCCTTCTTGTTGTAGATGACTGCGGCGCCGAGGCTCCTGGCGGGGTTGATGCCGGTGCCGGTGATGGGGATGGTGGCGAGGTGC
ACCATGAAGACGGCGAACCCGATGGGGAGCGGGGCCAGCACGGGGACGTGGGAGTCGCGGGCGCTGCGCTTGGGGTCGGTGGCTGAGAAGACGGTGTACA
CCAGCACGAAGGTGACGGCAGGGTTGATGTGGCCCCCCGAGATGCCGGCGGTGCAGTAGACGAGGACGAAGATCATGCCGCCGAAGGCCCAGGCGATGCC
GAGCACGCCGACGCCGCCGCACGGGTCGGCCGCCGACTGCACCTTGTAGCCGATGACGG