Detailed information on CNT30659258


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696585Triticum dicoccoidesOryza sativa66.5146.6986.52141forward
CNT30522452Triticum dicoccoidesSetaria italica51.4216.1788.99109forward
CNT30435859Triticum dicoccoidesAegilops tauschii7518.0192.45159forward
CNT30251661Triticum dicoccoidesAvena sativa94.3418.6489200forward
CNT30371172Triticum dicoccoidesOryza glumipatula77.8339.6683.64165forward
CNT30109239Triticum dicoccoidesOryza longistaminata80.1931.3785.29170forward
CNT30149774Triticum dicoccoidesBrachypodium distachyon41.0410.2589.6687forward
CNT30103549Triticum dicoccoidesOryza rufipogon82.0825.4883.33174forward
CNT30577809Triticum dicoccoidesOryza barthii80.1920.3384.12170forward
CNT30498790Triticum dicoccoidesDigitaria exilis51.8913.5181.82110forward
CNT30117627Triticum dicoccoidesOryza nivara65.092185.51138forward
CNT30551656Triticum dicoccoidesOryza brachyantha56.1313.9586.55119forward

Expression of CNT30659258

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MAPGRSTARWRRRCGAARRSRRRGGRRPGAR*

>peptide 2 (69 aa)
RGGIGAGDDTEGGALGHRHDLGWLLAGARRVGGGAVELRDAVGAVEVGGQGHAEGAAAVKGTYRLALVLA

>peptide 3 (69 aa)
GVAVLAPAMTPKVVPSDTGTILDGSWPEHGALEAALWSCATQSAPWRSAARGTLKAPLPSRAPTALLSYS

Sequence

>CNT30659258
GGCGTGGCGGTATTGGCGCCGGCGATGACACCGAAGGTGGTGCCCTCGGACACCGGCACGATCTTGGATGGCTCCTGGCCGGAGCACGGCGCGTTGGAGG
CGGCGCTGTGGAGCTGCGCGACGCAGTCGGCGCCGTGGAGGTCGGCGGCCAGGGGCACGCTGAAGGCGCCGCTGCCGTCAAGGGCACCTACCGCCTTGCT
CTCGTACTCGCC