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Detailed information on CNT30658659


BLAST search results

BLAST vs Swiss-Prot:
sp|P27665|PSBO_WHEAT, E-value = 2e-123

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042430Triticum dicoccoidesPrunus dulcis20.7715.8981.5173forward
CNT30342704Triticum dicoccoidesEragrostis tef65.9175.6285.25549forward
CNT30621504Triticum dicoccoidesCajanus cajan20.4110.7982.35170forward
CNT30579974Triticum dicoccoidesEchinochloa crusgalli57.026790.74475forward

Expression of CNT30658659

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSLVFWKAGGSFFWMPSALTVKEVGSRQNFFISYLPALKGKESTPPSMVGHWFAVPVPFTSM*

>peptide 2 (48 aa)
LHALEDTDHLAGLRLALGHAERDVARGRGRVLHVLLSQLLLVSSASGR*

>peptide 3 (54 aa)
CTLSKTPITSPVSGLLLVTLSVMLPVDEDAFFTFSLANSSSSPLPPAGSATALS*

Sequence

>CNT30658659
CTGCACGCTCTCGAAGACACCGATCACCTCGCCGGTCTCCGGCTTGCTCTTGGTCACGCTGAGCGTGATGTTGCCCGTGGACGAGGACGCGTTCTTCACG
TTCTCCTTAGCCAACTCCTCCTCGTCTCCTCTGCCTCCGGCAGGTAGCGCCACGGCGTTGTCGTAGCCAGTAGAGCCACCACGGCCCTTTGGGTCGAGGA
AAGACGAACCCCTGTAGCTGGGCACGAGGAAGGGCCCGCTGAAGCTCTCGGGCTTGCCGGTAGCGACGAGCTGCTTGACGGTGAAGAGGAAGGGCACTCG
CTCGCCTCCGGGGAGCTGCACGGTGAGACGGGTCATGAGCTTGGTTTTCTGGAAGGCCGGCGGCTCGTTCTTCTGGATGCCCTCGGCCTTGACGGTGAAG
GAGGTGGGCTCCAGGCAGAACTTCTTCATCTCGTACTTGCCGGCCTTGAAGGGGAAGGAGTCGACGCCGCCGTCGATGGTCGGGCACTGGTTCGCGGTGC
CGGTACCCTTCACCTCCATGTAGGTCTTGCTCTGGATCTCGTCGAAGGTCAGCCTCTTGGGCGCCCCCTCCGCGCTCGCGCCCTGCACCCACGCCTGGCA
GAGGTGATCCTGGCGCCAGCGTCAACGCCGAACGCCCGGGCGACGTGCGACGACGGCCGCGCGGAGGAGGCCCGGCCGCCGATCTTGGCCGGCATCAGCG
TGGCCGCGGCTTGGAGAGACGCTGCCATGTTGGTCGGTGGCTTGGTACGCGGGAGGATCGATCCCACTCGTGGTTGAGAGGCGTGTTGTCAGGGCAGGCA
AGTGTTATCTATGCGAGGCGCGGATAAGAGACG