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Detailed information on CNT30656221


BLAST search results

BLAST vs Swiss-Prot:
sp|P05621|H2B2_WHEAT, E-value = 9e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283395Triticum dicoccoidesTriticum aestivum98.5288.3399.54863forward
CNT30220727Triticum dicoccoidesHordeum vulgare59.5966.9293.68522forward
CNT30434666Triticum dicoccoidesAegilops tauschii79.5794.9696.41697forward
CNT30136307Triticum dicoccoidesLolium perenne32.0847.3195.37281forward
CNT30683451Triticum dicoccoidesTriticum urartu46.1255.3491.34404forward
CNT30719869Triticum dicoccoidesTriticum spelta65.1810099.82571forward

Expression of CNT30656221

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MVGFLLYLASLADSPASFSKMSLMKEFMMDMALEEMPMSGCTCFSTLKM*

>peptide 2 (48 aa)
LMHNYFSISVCTTEFSSYNYQIPRNSVVALVADNQSSATKIQMARQDH*

Sequence

>CNT30656221
CTGATGCATAATTATTTCTCAATCTCGGTTTGCACCACTGAATTCAGTTCTTACAACTACCAAATTCCAAGAAATTCAGTAGTAGCACTGGTTGCAGATA
ACCAGAGTTCAGCAACCAAAATACAAATGGCCAGACAAGATCACTAATACAGATAGGACCACAACTTCAGTTCTAGATAGATTTCAGTTTGCCAAAGCAG
CAACTTCAGCTCTTACAACCAACGGGCCAACAAAGCGTTGGCAATCACCCAGCACAGGTACTACTACCACCACCACTACTTGCAGATAGATAGATAAGCA
GAGTCAAGAGTACAGATGCAGATGCAGAAACCAACTGCACGCCGTCAGTCTAGGAGGATGTGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTG
CTTGGCGAGCTCCCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTACCTCGCGAGCTTGGCCGACTCG
CCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTCAGCACCTTGA
AGATGTAGATCTTGTACGTCTCCACGCCCTTCTTCGCCTTGCTGCCCTTCTTCCTGCCCCGGGTCTTCCCCTCGCCGCCGGCCTCCTTGGACGCCGTCTT
GCCTGCCGGCAGCCGCTTCTCGGCCTTGGGCTTCTTCCCCGCGGGGGTCTTCTCCGCCGCCTTCTCCACCTTGTTCTCGGCCGCCGGCTTCTTGTCTGCC
TTTGGGGCCATGGCTGCCGCTGGAGCTTCTCGGAGGTGAGAGTGAGGGAGAGGTGTTTCGCTCGGAGGTGGGGAAT