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Detailed information on CNT30655384

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30501325	Rosa chinensis	Coffea canephora	60.75	21.61	93	500	reverse complement
CNT30618776	Rosa chinensis	Sesamum indicum	60.15	23.97	93.33	495	reverse complement
CNT30228912	Rosa chinensis	Ananas comosus	29.16	64.34	82.08	240	reverse complement
CNT30679583	Rosa chinensis	Triticum urartu	60.15	10.62	87.47	495	reverse complement
CNT3035046	Rosa chinensis	Cucumis melo	60.15	19.12	93.33	495	forward
CNT30104494	Rosa chinensis	Oryza rufipogon	18.47	66.09	88.82	152	forward

Expression of CNT30655384

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MRSMPQQKDGPLCISFFPEGKKKKYPHHGEPLLVIGMR*

Sequence

>CNT30655384
GCGGGCCCCTACTAATGTATTGTATAGTAGGGTATAGTAGGCGAGCGAGTTAGCGAAGACGCTTAGGCTAATAGATAAGAGAGCGTCGGTGCGTAGCCTT
CATTCTACTACGCTACGAAAGAAAAGGTTACGAAGTCACTTAGCTCGACGTTAGGAGAGTCAAGGGGGGAACACCATACCTACATAGAAGAACCGCTGTT
CGCTGACTTTCTAAGGTCTAAACCTTTCGCTCCCCGGCGCAAAGCCGCTTCGCACCACTGAGAGACTACTTAAGATTAAATTAAAAAGGCGCCCTACTTA
GTTGACTGACAATGACAAAGGCTTGCGAAACTAAGTAGGGCCTGAGGCCCCCTGCGAATCCGTAAATATGAGGAGCATGCCGCAACAAAAGGATGGTCCC
CTATGTATTTCATTCTTTCCGGAAGGGAAAAAAAAGAAGTACCCCCATCATGGTGAACCTCTCCTTGTGATCGGGATGAGGTAGATGCCTCCCAGCCGGG
GGGGCGGATCGAATCGGAGTTTCCTTAGGTAGCCACCGACCTACAGTTATCCTTAAACTTCCGTGCTTGGTGGAGAAGAAGCGAACAAAGGTACGCTCGC
TTGCTGTCTTGTTCTCTGCCGCGAACTGGGATCGCTCGCCAGCTAGGTCAGATTGGAGCTACTTTTTTTTTGAGAACATATTACCCATATTCGGGGACAA
GGGGCGGAACGACCTCTCGATCTACTTACTGCAGCCCGGGAATAAAAACGTCGTCTAGGCGTTCCCTGTTGCTCCGATCTCCCCTACGCCTAGGACGTTG
TCTGGGCCAAGAGCCATAGTTAG