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Detailed information on CNT30653851


BLAST search results

BLAST vs Swiss-Prot:
sp|O82150|FTSH_TOBAC, E-value = 4e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673684Rosa chinensisSetaria viridis13.3226.381.9116forward
CNT30516796Rosa chinensisJuglans regia12.5121.1788.07109forward
CNT30709273Rosa chinensisGlycine max15.3851.7484.33134forward
CNT30563498Rosa chinensisActinidia chinensis8.1525.0991.5571forward
CNT3085131Rosa chinensisVigna radiata8.1524.9190.1471forward
CNT30543849Rosa chinensisBrassica napus11.634.0185.15101forward
CNT30144812Rosa chinensisMedicago truncatula33.6434.9285.32293forward
CNT3079806Rosa chinensisBrassica juncea15.7332.9387.59137forward
CNT30479936Rosa chinensisArabidopsis halleri25.0319.4687.61218forward
CNT30102190Rosa chinensisOryza rufipogon16.4237.0583.22143forward
CNT30576794Rosa chinensisOryza barthii16.4224.283.22143forward
CNT30175903Rosa chinensisVigna angularis13.0925.2285.09114forward

Expression of CNT30653851

Peptides detected in this lncRNA

>peptide 1 (41 aa)
RMAASFIRFCRSAPVKPGVLLAIFSKSTSFASAFPLECTCH*

>peptide 2 (37 aa)
MDLKESELGSSFLAITSFRLEKNGRGRSGADDLVVLGV

>peptide 3 (29 aa)
MNTMHGAFDFAFSNKSLTLEARRPSIAVS*

Sequence

>CNT30653851
CAAGAATGGCAGCTTCGTTCATCAGGTTCTGTAGATCTGCTCCTGTGAAACCAGGCGTTCTTCTTGCAATCTTTTCAAAGTCCACATCCTTTGCCAGTGC
CTTCCCTCTGGAGTGCACCTGCCATTAAAAAGATCTTAACTCTCCCAGCAACATCAGGCCTGTCCACGGTTACTTGTCTGTCAAACCTTCCGGGCCTCAA
CAGAGCTGAATCAAGAACATCCGGCCTGTTAGTCGCCGCCAACACAATCACACCAGAATTACCAGAAAAACCATCCATCTCCGTCAACAACTGATTAATA
GTCTGTTCTCTCTCGTCATTTCCACCTCCCATTCCTGCCCCTCTCTGCCTCCCAACTGCATCAATCTCATCAATGAACACAATGCACGGCGCTTTCGACT
TTGCCTTCTCAAACAAATCCCTCACTCTCGAGGCGCGACGGCCGTCAATCGCCGTCAGCTGAAGAGCAGAGCCTTCTTTGGCGAACCTGACTCTCTCCAC
CTTCCCCTTCTTCACGGCGTTCAAGAACTCGCTGTAACGCCATTGGCTGCCTTCCGGGAGGTCAGTAACGGACTGCTGTTGTGGCTTTGGTGCTGTTAAG
TTGAGGTTCTGAGAGAAGGGAGAGGAATTGGGCTTGGTGGGCTGGGCCTGGAGCAGCGGGGCGGGCTGTGACGGTGGTGTGACGTTGTCTACGGCGAGGG
CTTGTTGGGTGGTGAGTGAAGTAAAGAGCAAGCCAGCTAGAGTGGCCTGGGATGTGATGGATTTGAAGGAGTCGGAATTGGGTTCTTCATTTTTGGCAAT
TACAAGCTTTCGTTTGGAGAAGAACGGAAGAGGAAGAAGTGGTGCTGATGATCTGGTGGTTTTGGGGGTTG