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Detailed information on CNT30653768


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SUL1|RD19C_ARATH, E-value = 3e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376612Rosa chinensisArabidopsis thaliana48.7937.7679.73222forward
CNT3046025Rosa chinensisPrunus dulcis35.3819.0891.3161forward
CNT3092736Rosa chinensisSolanum tuberosum23.7417.4883.33108forward
CNT30714701Rosa chinensisMalus domestica golden4012.4490.66182forward
CNT30410960Rosa chinensisPapaver somniferum25.2728.6881.74115forward
CNT30704624Rosa chinensisPrunus avium42.648.493.81194forward
CNT3049087Rosa chinensisCucumis sativus4024.3386.26182forward

Expression of CNT30653768

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MSPPLQPASQNRSGVGIGRQPQPSEPQMASPELGRSQIGEPSDAVLGRGVHSLVPLGPPHVGLEHLEPVVVLLL

Sequence

>CNT30653768
GGGAAGAGGACAAAAAACACAAATCTTAATAAATTACCAGCAAGAGGGCCATTCTTAACAAGATTGGCAGCAATTTGATCTTCATCAAGGGAGACAACAC
TGAAGTTGGAAACTTTGGCTGCAATTTTGGTCTTGTCAAACTTGCAGGTTCCACGATCAGTACCAGTGTATGGATAATCTTTTTCCTTCATAAGTCCACC
AGCTTTGAGTGTGTACTCAAAGGCACTGTTCATGAGCCCACCATTGCAACCAGCGTCGCAGAATCGGAGCGGTGTTGGCATCGGCCGGCAGCCTCAGCCC
TCGGAGCCCCAAATGGCTTCTCCTGAACTCGGCCGGAGTCAAATCGGAGAACCGAGTGACGCCGTGTTGGGCCGTGGGGTCCATTCGCTGGTGCCTCTTG
GCCCTCCTCATGTTGGTCTTGAACACCTCGAACCTGTAGTCGTGCTCCTCCTGGC