Detailed information on CNT30651694


BLAST search results

BLAST vs Swiss-Prot:
sp|O23254|GLYC4_ARATH, E-value = 3e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30558966Rosa chinensisActinidia chinensis70.1173.386.05258forward

Expression of CNT30651694

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MTAKEVKFSEAMSSMPRHWRRFSFSIRSWISGSTDSRLVLPHAFTASIGENERQRIERGGEEEEEEMVVV

>peptide 2 (28 aa)
MRLLPPLERMRDRELREVEKKKKKKWLWW

>peptide 3 (45 aa)
EVQAHDAVVGLEHGGVGGEVGRGAGVRLDIDAPLRRVEVESLEGA*

Sequence

>CNT30651694
GGGAGGTCCAGGCCCATGATGCGGTCGTGGGGCTGGAGCACGGCGGTGTAGGCGGCGAAGTTGGCCGGGGAGCCGGAGTAAGGCTGGACATTGACGCCCC
ACTGAGACGCGTCGAGGTGGAAAGCCTGGAGGGCGCGTGAGCGGCAGAGGGCCTCGATGACGGCGAAGGAGGTGAAGTTCTCGGAGGCGATGAGCTCGAT
GCCGCGGCATTGGCGACGCTTCTCCTTCTCGATCAGGTCGTGGATCTCTGGGTCCACGGACTCCAGGTTGGTGTTACCCCATGCGTTTACTGCCTCCATT
GGAGAGAATGAGAGACAGAGAATTGAGAGAGGTGGAGAAGAAGAAGAAGAAGAAATGGTTGTGGTGGT