Detailed information on CNT30650814


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728738Rosa chinensisCorchorus capsularis30.113.5590.887forward
CNT30490297Rosa chinensisOlea europaea22.495.8289.2365forward
CNT30709030Rosa chinensisGlycine max39.125.3990.27113forward
CNT30301323Rosa chinensisTriticum aestivum38.7522.5887.5112forward
CNT3086406Rosa chinensisVigna radiata26.993.3184.6278forward
CNT30344011Rosa chinensisEragrostis tef26.34.9792.1176forward
CNT30364601Rosa chinensisSorghum bicolor25.9527.5786.6775forward
CNT30575210Rosa chinensisOryza barthii32.1812.2487.193forward
CNT30592968Rosa chinensisEragrostis curvula26.310.5393.4276forward

Expression of CNT30650814

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MSAAAMRSALRWLFMMDFWWRRCSDGVQESPSQFGRFSYFQPGSVRRRTITASAPAA*

>peptide 2 (67 aa)
DGVEQPVEDERRGDEKRVALALHDGLLVAEVLGRSAGVAVAVRPILVLPAGEREEEDHHGLCARGVA*

Sequence

>CNT30650814
GTGACGGTGTAGAGCAGCCAGTAGAAGATGAGCGCCGCGGCGATGAGAAGCGCGTTGCGCTGGCTCTTCATGATGGACTTCTGGTGGCGGAGGTGCTCGG
ACGGAGTGCAGGAGTCGCCGTCGCAGTTCGGCCGATTCTCGTACTTCCAGCCGGGGAGCGTGAGGAGGAGGACCATCACGGCCTCTGCGCCCGCGGCGTA
GCCTAGCACCACCCACTCTAGAGCCATCGGATCTCAGATTCCGGCGAGGTTTTGAAAGGGATCGTTTGCTTCGTGAAGAAGGAGATTTC