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Detailed information on CNT3064332


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692619Selaginella moellendorffiiOryza sativa26.7839.8385.1194forward
CNT30530112Selaginella moellendorffiiEucalyptus grandis17.9520.8687.363forward
CNT30586912Selaginella moellendorffiiMusa acuminata24.525.4486.0586forward
CNT30343741Selaginella moellendorffiiEragrostis tef32.1946.3183.19113forward
CNT30331317Selaginella moellendorffiiDioscorea rotundata25.0727.0885.2388forward

Expression of CNT3064332

Peptides detected in this lncRNA

>peptide 1 (45 aa)
TDVSWITTDPLIPLLVHEECKLGGHLDLVPDTLDRLEAEKNPRNA*

>peptide 2 (30 aa)
HGRKLDHHGSLDSPSRPRRMQTWWPLGPCP*

Sequence

>CNT3064332
GCACGGACGTAAGCTGGATCACCACGGATCCCTTGATTCCCCTTCTCGTCCACGAAGAATGCAAACTTGGTGGCCACTTGGACCTTGTCCCTGATACCCT
TGATCGCCTAGAAGCCGAAAAAAATCCACGAAATGCTTAGCCAAATCCTACCTTGCCGACGAGGATTTCGTTGGTGTGAGGCCCGTACTTGTCCGCAGTG
TCGAGGAATGTGATCCCCGACTCAATCGCCGTGCGAATGAGCTCGATCATCTCCCCCTCCGGCTTGGGAGGGCCGTAGAATGCCGACATTCCCATGCATC
CGAGGCCTTGCTTGGAGACCTCGAGACCTTGCGAGCCGAGCTTGATGCGCT