Detailed information on CNT3064134


BLAST search results

BLAST vs Swiss-Prot:
sp|Q69UI2|RS131_ORYSJ, E-value = 5e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694623Selaginella moellendorffiiOryza sativa27.965.4593.2259forward
CNT30675786Selaginella moellendorffiiSetaria viridis65.441.1982.61138forward
CNT30523595Selaginella moellendorffiiSetaria italica68.7211.1282.76145forward
CNT30307182Selaginella moellendorffiiTriticum aestivum61.1434.1381.4129forward
CNT30436841Selaginella moellendorffiiAegilops tauschii23.227.3791.8449forward
CNT30131980Selaginella moellendorffiiLolium perenne36.9712.787.1878forward
CNT30688700Selaginella moellendorffiiTriticum urartu61.6131.481.54130forward
CNT30350258Selaginella moellendorffiiEragrostis tef20.854.193.1844forward
CNT30581348Selaginella moellendorffiiEchinochloa crusgalli29.866.0990.4863forward

Expression of CNT3064134

Peptides detected in this lncRNA

>peptide 1 (31 aa)
IHCQDQHVRSRLEGASWSSCSILRGGGLCSR*

Sequence

>CNT3064134
ATTCACTGCCAAGATCAACACGTAAGATCAAGGTTGGAGGGAGCTTCTTGGTCCTCTTGTAGTATCTTGCGAGGCGGTGGACTCTGCTCTCGATGAGGAT
GAGGCGGAACTTGGAGTCCTTGTCCTTCCGGTTTCGCTCCAGATGCTTGCGAACAGCCACGGCCTTTTTGATCAGGTAGTACAAGTCTTCCGGGATCTCT
GGGCCCAATCC