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Detailed information on CNT30639037


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 2e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30120885Capsicum annuumCitrus clementina72.5895.8395.65368forward

Expression of CNT30639037

Peptides detected in this lncRNA

>peptide 1 (56 aa)
RGWPKCESTSTDVAASGGCNSTLFVVAATARRAFGLQDPFALRRSDRDPRSGGITR*

>peptide 2 (73 aa)
AAGLNASPRRRTSRQVVVVTQLSLSSRLRPVARSDSRTPSRSGAPTATPGQAGLPAEFKHINKRRKRNLQGFP*

Sequence

>CNT30639037
TCGCGGCTGGCCTAAATGCGAGTCCACGTCGACGGACGTCGCGGCAAGTGGTGGTTGTAACTCAACTCTCTTTGTCGTCGCGGCTACGGCCCGTCGCGCG
TTCGGACTCCAGGACCCCTTCGCGCTCAGGCGCTCCGACCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAA
AGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTAGTCTGGAGAAGC
GTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTC
TACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGG
GAAAGAT