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Detailed information on CNT30637312


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 4e-92

BLAST vs NONCODE:
NONSLYT000337, E-value = 2e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318541Capsicum annuumCorylus avellana51.1646.9184.55220forward
CNT30700549Capsicum annuumQuercus lobata40.9344.5680.68176forward
CNT30500451Capsicum annuumCoffea canephora96.9839.0883.69417forward
CNT30615836Capsicum annuumSesamum indicum46.9852.7483.17202forward
CNT30277485Capsicum annuumChenopodium quinoa68.3734.4782.99294forward
CNT30727603Capsicum annuumCorchorus capsularis95.358383.41410forward
CNT30524728Capsicum annuumPhaseolus vulgaris70.2355.9378.81302forward
CNT30486152Capsicum annuumOlea europaea43.4920.6679.68187forward
CNT30504810Capsicum annuumNicotiana attenuata92.3360.9892.44397forward
CNT30710642Capsicum annuumGlycine max37.2117.1181.88160forward
CNT3098150Capsicum annuumSolanum tuberosum66.5158.3782.17286forward
CNT30143812Capsicum annuumMedicago truncatula97.4433.8781.62419forward
CNT30457014Capsicum annuumSaccharum spontaneum29.7716.7585.94128forward
CNT30477892Capsicum annuumArabidopsis halleri36.7414.7782.28158forward
CNT30358465Capsicum annuumLactuca sativa98.1440.4683.89422forward
CNT30424172Capsicum annuumPapaver somniferum81.165085.39349forward
CNT3055709Capsicum annuumAmborella trichopoda54.4235.7882.48234forward
CNT30174824Capsicum annuumVigna angularis46.2820.9583.92199forward
CNT30726386Capsicum annuumLupinus angustifolius63.2630.2684.19272forward

Expression of CNT30637312

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MNRRSRTSQMINLINFQQNRFHNIMSNKFKSMIPKMMHHIFFPPSKEIINNNNIITSLNQLIHQMTPYKTRPTRYHYPHPLPSY

>peptide 2 (48 aa)
TYWVHISPICFLLWMLKWITINLTCTSKQEPCTNSLGKAQHVESTHHI*

Sequence

>CNT30637312
CACCTATTGGGTTCACATTTCCCCAATATGTTTCCTTTTGTGGATGCTCAAGTGGATCACCATAAACCTCACTTGTACTAGTAAGCAAGAACCTTGCACC
AATTCTCTTGGCAAGGCCCAACATGTTGAGAGTACCCATCACATTTGATATAATAGTCTTAACAGGATTATACTTATAATGAACAGGAGAAGCAGGACAA
GCCAAATGATAAATCTGATCAACTTCCAACAAAATAGGTTCCACAACATCATGTCTAATAAGTTCAAATCTATGATTCCCAAAATGATGCATCACATTTT
CTTTCCTCCCAGTAAAGAAATTATCAATAACAATAACATCATCACCTCTCTTAATCAACTTATCCACCAAATGACTCCCTACAAAACCCGCCCCACCCGT
TACCACTACCCTCATCCTCTTCCTTCCTAT