Detailed information on CNT30629049


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39817|CALX_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONGMAT001818, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30278532Vigna unguiculataChenopodium quinoa58.3960.7881.29668forward
CNT30728459Vigna unguiculataCorchorus capsularis32.6960.3279.95374forward
CNT30190468Vigna unguiculataSecale cereale59.7970.7378.95684forward
CNT3048947Vigna unguiculataCucumis sativus32.7826.580.27375forward

Expression of CNT30629049

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MPFSLISRIPLHWPLPLTTAWGGFTFWVLNLWGFPFTILLIVPIFRFCGLWIIYLLRFII*

>peptide 2 (74 aa)
WNPARPFDPASASSAFCFSFSTENLGFQVVSRYDSAILSSLAIKMLSNKMPSCIVQISIPIAAIGSKSGFLSSK*

>peptide 3 (54 aa)
MVFNILPSLGILVFENEVYFVCGTTFIRTEHDRIRRFVVKFLRFPSSLLWSEIF*

>peptide 4 (49 aa)
MKCTLFVEPHLSGPNMIEYGDSLSNSLGFHPASCGRRYFRYAPPHSRPF*

Sequence

>CNT30629049
CTGGAATCCAGCAAGACCATTTGATCCAGCTTCAGCTTCCTCTGCCTTCTGTTTCTCTTTTTCAACTGAAAACTTGGGTTTCCAAGTAGTCTCCCGATAC
GACTCAGCAATTTTATCATCTTTAGCTATCAAGATGTTGTCAAACAAAATGCCATCTTGCATTGTCCAAATCTCAATACCAATAGCTGCGATTGGCTCAA
AATCAGGTTTCTTAAGTTCAAAGTAAGCAGGGTTTGGAATATCCCTAGGTTTCTTAAGTTCAAAGTAAGCAGGGTTTGGAATATCCCTAGGTTTCCATAT
ACCCTTATAAGCAGGATTTTCAATGAGTGGTGCATGCCATTTTCCCTTATAAGCAGGATTCCTCTTCATTGGCCTCTTCCACTCACCACAGCCTGGGGCG
GCTTCACATTTTGGGTTCTCAATCTTTGGGGCTTCCCATTCACCATCCTCCTCATCGTCCCAATCTTCCGGTTTTGTGGCCTCTGGATCATCTATCTCCT
CCGGTTCATCATCTAACCATCCTTCAGGTTTTTCAGCTTCTTCATCAACAATTTCCAAGGGTGCATCCTCATCCCAGTCGTCTGGCTTTACCGCACTTGG
GTCTGGAATTTTCTCTCTCTCATCCCAGTCCTCAGGCTTCTTATCGTCAGCATCTGGGATTGTCTTGGGAGGGATAAGAGGAGGTTCAAAATCATCAGCA
CTCAAGAAGTTTGCCTTCTTCTTCTGTTCCCCATCTACCAAAATTTGCACCTCATTGTCAGGCTTCAAAATAGCCGTGTAAACATGAGATAATTTATCAG
AAGGGACAGAAGGGGGAGCCTTAAGATGGTGTTCAACATACTCCCCAGTCTTGGGATTCTTGTGTTTGAAAATGAAGTGTACTTTGTTTGTGGAACCACA
TTTATCAGGACCGAACATGATAGAATACGGAGATTCGTTGTCAAATTCCTTAGGTTTCCATCCAGCCTCCTGTGGTCGGAGATATTTTAGATATGCTCCA
CCGCATTCAAGGCCATTCTGAAGCCGAGTTTCAAACTGGAGAACAACAGTTCCGTCCTTGAAACTCACCGCCTGGTCAAGTTCCTTCACTATGGCGTATT
TCCTCGCTTTCTCACTGACTAGAAGACCATAATCATCATGTCCC