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Detailed information on CNT30628664


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 4e-93

BLAST vs NONCODE:
NONMTRT002043, E-value = 2e-78

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701273Vigna unguiculataQuercus lobata39.1971.5884.76466forward
CNT30381257Vigna unguiculataManihot esculenta38.7767.285.9461forward
CNT30525067Vigna unguiculataPhaseolus vulgaris50.890.8390.07604forward
CNT3087979Vigna unguiculataVigna radiata51.9865.6793.04618forward
CNT30620158Vigna unguiculataCajanus cajan39.767.0588.98472forward
CNT3025196Vigna unguiculataPopulus trichocarpa39.1966.0186.7466forward
CNT30176450Vigna unguiculataVigna angularis54.9259.3685.91653forward
CNT30111732Vigna unguiculataFicus carica38.136.8987.2453forward

Expression of CNT30628664

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MALTNHHEDAGQGEGWTPSGYCSQQGSSHLPTASLRRSASAGPGEFPPCPEFSPSHCQWCQNSQPPE*

>peptide 2 (40 aa)
MVSELSTSRVIVFPVRVLTKICICTVISNQQMNQNRNQTK*

>peptide 3 (31 aa)
MVSELSTSRVMVFPVKVFTKICMPPLSRRTR*

Sequence

>CNT30628664
CTGAAACATGAACTCACTTAGAGGATTATTCCTTAAATATAAACGACCAAATTACTCCGTTTAGGGTTTAGGGACAAAATCCCAAATCTAATTTATATCC
CTCTTTTAAACACTACAATACCATGGTCACTGCTAAGGCACAGAATGGTGACATCGCGGCAAAGCATGAAAAATAATAAATTTCAATGCGGATGAAGTTG
ATATTAATGGATTACAAAGTTGTTGACAGCAATTAAAATAAACCAAATTTATTGATCGGGCCAACATAGACCCATACACAGCAAGTTCTCAAATTTGGAG
ACAACACCACAGAAGGAGGAGTTATGGCACTTACAAACCACCACGAAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGG
GTCCTCCCATCTTCCAACTGCTTCCCTGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATTTTCGCCTTCACATTGTCAATGG
TGTCAGAACTCTCAACCTCCAGAGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAAATCTGCATGCCACCCCTGAGTCGGAGGACAAGGTGAAGGGTTGA
CTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC
TGAATCTTAGCCTTCACGTTGTCAATGGTGTCTGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCATCTGCACCG
TCATATCCAACCAACAGATGAATCAAAATCGAAATCAAACCAAATAAACACGCACAAACACATAAGAATCTTAATTAGAATAATTGACCAAATTTAGGGT
TCAACTCCAGATAAAAATCATGGTCCCCAAACAAAGAAATCAAAACTGAGAATCTTAATCAGAATAATTGAAACATTCAAAACTGAAAAATCGAAGCCTG
AAATTTCAAGAACGTCCACAAGATTTTCATTATCAGGTTTTAAAGGCAGCAGCGAAAAGCCTACAACGACATTGATACACTTCATGTTCGCAGAACCATA
CACCAATTACCGTAAAATTAAAAACCTAACAGATTTTCCAGAGACAATATTGAATTGAAAAAACAGGTGGAGAAGAGAAACATACCTTG