Detailed information on CNT30628037


BLAST search results

BLAST vs Swiss-Prot:
sp|Q04654|ATP6_VICFA, E-value = 2e-82

BLAST vs NONCODE:
NONMTRT000657, E-value = 1e-71

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222092Daucus carotaHordeum vulgare59.4399.3291.81293forward
CNT30441767Daucus carotaAegilops tauschii91.6865.7992.48452forward
CNT30683552Daucus carotaTriticum urartu91.4815.9992.46451forward
CNT30619669Daucus carotaCajanus cajan28.631.2696.45141forward
CNT30596128Daucus carotaOryza meridionalis79.7243.2392.88393forward
CNT30570373Daucus carotaVitis vinifera39.7648.2892.86196forward

Expression of CNT30628037

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRENNEGLAQGVLKKVLTAVGLLRVMKSLKNEAHFFEIPRE*

Sequence

>CNT30628037
CTTCGCTCCTCGCTTTTGTTCAATTATAAATAACCACTTCACTTTGATGGAGATTTGTAGCATCATTCAAGTAAATACAGATTGAGATTGTAGAAACATG
AGCTTGTGATATAGCTACACCTAATTCCGGACCGGTTAATGCAAGAACTATAAATAAAGGACCCAGATCTCCTATGAAATAGAAAAGATCATTCATACAT
AGCATAGTCCAAGCGAACCCACTTAAAATCTTTACTGAACTATGACCGGCCATCATATTAGCAAATAAACGTATTCCTGAGCTTAATGCGCGAAAACAAT
GAGGGATTAGCTCAAGGAGTACTAAAAAAGGTGCTAACGGCAGTGGGACTCCTGCGGGTAATGAAAAGCTTAAAAAATGAAGCCCATTTCTTTGAAATCC
CACGAGAGTAATGCCAATAAAAATGGAAAATGAGAGGCCCAAAGTAATGAGAAAATGACTTGTAACTGTGAAGCTATAAGGTATCATACCCTG