Detailed information on CNT30627257


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBU3|PSBA_LOTJA, E-value = 2e-07

BLAST vs NONCODE:
NONMTRT000175, E-value = 3e-42

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30119671Daucus carotaCitrus clementina25.373.5990.251forward

Expression of CNT30627257

Peptides detected in this lncRNA

>peptide 1 (36 aa)
VWFRFFFLPEPVTFISRFIFCGFPDQTRGIPSEKLP*

Sequence

>CNT30627257
CTGTGTGGTTTCGTTTCTTCTTCTTGCCCGAACCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAGGCATACCATCAGA
AAAGCTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGTCGGTCGCGGATG
A