Detailed information on CNT30622201


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372815Cajanus cajanArabidopsis thaliana53.642.586.55119forward
CNT30381246Cajanus cajanManihot esculenta44.1412.0787.7698forward
CNT30196808Cajanus cajanPisum sativum30.1828.2789.5567forward
CNT30490066Cajanus cajanOlea europaea52.713.1283.76117forward
CNT3093146Cajanus cajanSolanum tuberosum21.6213.8791.6748forward
CNT3059480Cajanus cajanArabidopsis lyrata30.6328.3388.2468forward
CNT30217937Cajanus cajanKalanchoe fedtschenkoi27.9314.4587.162forward
CNT30648504Cajanus cajanRosa chinensis49.5515.1189.09110forward

Expression of CNT30622201

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MAMTSRGDSLRPCQHLKKFLPILPNPFMATFSFASTTPFLYPP

>peptide 2 (30 aa)
RVAVRDNFDGLSINGNDIRTHRLVLHLQCR*

>peptide 3 (72 aa)
GLRSETTLMAFPSTEMISEPTGLFYTSSVVDGNDIKRGFFTTVPAPQEVPSNPSKPVYGNLQFCFYYTLLVSS

Sequence

>CNT30622201
CAGGGTTGCGGTCAGAGACAACTTTGATGGCCTTTCCATCAACGGAAATGATATCAGAACCCACAGGCTTGTTTTACACCTCCAGTGTCGTTGATGGCAA
TGACATCAAGAGGGGATTCTTTACGACCGTGCCAGCACCTCAAGAAGTTCCTTCCAATCCTTCCAAACCCGTTTATGGCAACCTTCAGTTTTGCTTCTAC
TACACCCTTCTTGTATCCTCCA