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Detailed information on CNT30620798


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 4e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696576Cajanus cajanOryza sativa37.7443.6882.74197forward
CNT30670612Cajanus cajanSetaria viridis37.7448.7682.74197forward
CNT30522839Cajanus cajanSetaria italica36.5932.6582.72191forward
CNT30703567Cajanus cajanQuercus lobata32.1833.2788.1168forward
CNT30375418Cajanus cajanArabidopsis thaliana22.4149.5884.62117forward
CNT3069058Cajanus cajanQuercus suber31.9919.0987.43167forward
CNT30196946Cajanus cajanPisum sativum33.3324.386.78174forward
CNT30504865Cajanus cajanNicotiana attenuata37.3638.0981.54195forward
CNT30186872Cajanus cajanSecale cereale29.6931.0683.23155forward
CNT30300261Cajanus cajanTriticum aestivum37.7441.1382.23197forward
CNT30220695Cajanus cajanHordeum vulgare29.1234.8683.55152forward
CNT30394714Cajanus cajanTriticum turgidum37.7444.8782.74197forward
CNT30565712Cajanus cajanActinidia chinensis29.8952.1785.9156forward
CNT3086297Cajanus cajanVigna radiata33.3314.9689.08174forward
CNT30553196Cajanus cajanOryza glaberrima37.7435.382.74197forward
CNT30440705Cajanus cajanAegilops tauschii41.7646.0982.57218forward
CNT30247481Cajanus cajanAvena sativa41.7647.4982.11218forward
CNT30664872Cajanus cajanTriticum dicoccoides37.7441.9182.74197forward
CNT30471244Cajanus cajanSaccharum spontaneum31.9917.4582.63167forward
CNT30135596Cajanus cajanLolium perenne29.1240.7584.87152forward
CNT3015042Cajanus cajanZea mays43.4938.3481.5227forward
CNT30229571Cajanus cajanAnanas comosus38.749.0383.66202forward
CNT30685043Cajanus cajanTriticum urartu41.7648.9982.57218forward
CNT30348363Cajanus cajanEragrostis tef25.6724.0683.58134forward
CNT30596905Cajanus cajanOryza meridionalis37.7432.482.23197forward
CNT30357929Cajanus cajanLactuca sativa31.9937.2880.84167forward
CNT30370989Cajanus cajanOryza glumipatula25.6721.4483.58134forward
CNT30645689Cajanus cajanCannabis sativa29.533.2687.66154forward
CNT30148852Cajanus cajanBrachypodium distachyon41.7649.183.49218forward
CNT30102668Cajanus cajanOryza rufipogon44.8343.2580.77234forward
CNT30577582Cajanus cajanOryza barthii37.7430.9782.23197forward
CNT30581397Cajanus cajanEchinochloa crusgalli37.7433.5682.23197forward
CNT30117527Cajanus cajanOryza nivara37.7434.282.23197forward

Expression of CNT30620798

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MNRRIETLIPNSLTTETVEGPPLPFEGVNNVHGSNSVANDVFEEDLENSASFLVDETADTLNAATSRQTPNRGLRNSLNVIPQNLTVSFRSS

Sequence

>CNT30620798
CTGAAACATTGCTTCGGGTTTTAAATCGAACGATCTAATTTCAATTAAGCGTATGATAACTTTTAACTTAGTTGGAACTAATTAACGAGAAATCACAAAT
ACACAAAGCGTGCGCCCAGGCTACAAAATAATGAAAAAGTTGATGTCAATCGGATTAACAAATTAAAAATTCTCGAAGCATAACCTGAAAGGCAAACAAA
AACAATTGTTCAACCTAAGCTAAAGCTCAAGAACTATTGCACAATATGAACAGAAGAATTGAAACCCTAATCCCCAATTCTCTAACCACCGAAACCGTAG
AGGGTCCTCCCCTGCCTTTTGAGGGCGTAAACAACGTCCATGGCAGTAACAGCGTCGCGAATGACGTTTTCGAGGAAGATCTTGAGAACTCCGCGAGTTT
CCTCGTAGATGAGACCGCTGATACGCTTAACGCCGCCACGTCTCGCCAGACGCCGAATCGCGGGCTTCGTAATTCCCTGAATGTTATCCCTCAGAACCTT
ACGGTGTCGTTTCGCTCCTCCC