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Detailed information on CNT30619612


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 1e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317753Cajanus cajanCorylus avellana43.9126.4483.15184forward
CNT30546681Cajanus cajanIpomoea triloba28.1625.1183.05118forward
CNT30616210Cajanus cajanSesamum indicum43.9114.7183.7184forward
CNT30198984Cajanus cajanPisum sativum50.62988.68212forward
CNT30712284Cajanus cajanGlycine max58.2351.9189.75244forward
CNT3042757Cajanus cajanPrunus dulcis54.8937.9586.09230forward
CNT3092650Cajanus cajanSolanum tuberosum32.735.6883.94137forward
CNT30397255Cajanus cajanTriticum turgidum38.1932.9981.25160forward
CNT30172567Cajanus cajanTrifolium pratense51.3131.5285.12215forward
CNT30439225Cajanus cajanAegilops tauschii38.6655.8681.48162forward
CNT3059678Cajanus cajanArabidopsis lyrata29.8325.9984125forward
CNT3082467Cajanus cajanBrassica juncea44.1525.881.62185forward
CNT30261175Cajanus cajanBrassica rapa32.729.0385.4137forward
CNT30611328Cajanus cajanArabis alpina34.8432.0286.3146forward
CNT30450830Cajanus cajanSaccharum spontaneum38.1919.3280.62160forward
CNT30139599Cajanus cajanLolium perenne38.1933.4781.88160forward
CNT30211420Cajanus cajanHelianthus annuus46.339.1180.93194forward
CNT30414711Cajanus cajanPapaver somniferum39.1417.1584.15164forward
CNT3052246Cajanus cajanAmborella trichopoda43.4415.181.32182forward
CNT3024855Cajanus cajanPopulus trichocarpa39.8628.4582.04167forward
CNT30325970Cajanus cajanAsparagus officinalis37.4722.7580.89157forward
CNT30101647Cajanus cajanOryza rufipogon30.5513.7381.25128forward
CNT30496126Cajanus cajanDigitaria exilis34.8421.4781.51146forward
CNT3050826Cajanus cajanCucumis sativus35.5643.784.56149forward

Expression of CNT30619612

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MLGVGDSIANHVLQENLENSSGLFVDQTTDSLNTTSSRQPTNRRFGDALNVL

Sequence

>CNT30619612
GATACTGTGGAGTGTTAAATTAGCAGGAGAAGACAAAACGTTTAACGTTGAGCTATAATCTTTAATGAAGAAACATTACAGGATATAATTCCAATCGAAG
TTATACAACTATTATCCAATGTAAAACTAGAGAAACATCCTACATTACAGAACCAAAGCCATTGAAAAGAACAAATTGTTCAGCCTCCGAATCCATAGAG
GGTCCTTCCCTGTCTCTTGAGCGCATAAACAACGTCCATGGCAGTAACAGTCTTCCTCCTAGCATGCTCGGTGTAGGTGACAGCATCGCGAATCACGTTC
TCCAAGAAAATCTTGAGAACTCCTCTGGTCTCTTCGTAGATCAAACCACTGATTCTCTTAACACCACCTCTTCTCGCCAACCTACGAATCGTAGGTTTGG
TGATGCCCTGAATGTTCTC