« Back to Sesamum indicum search


Detailed information on CNT30618876


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SI96|H2B3_ARATH, E-value = 3e-53

BLAST vs NONCODE:
NONMEST003205, E-value = 5e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3072234Sesamum indicumQuercus suber10.8227.9485.8176forward
CNT3086649Sesamum indicumVigna radiata18.8841.1581.11307forward
CNT30510004Sesamum indicumSolanum lycopersicum7.4439.6781.82121forward
CNT3066775Sesamum indicumLeersia perrieri7.3831.2581.67120forward
CNT30129800Sesamum indicumCorymbia citriodora23.0646.5884.53375forward
CNT30679698Sesamum indicumTriticum urartu3.5120.1494.7457reverse complement
CNT30363895Sesamum indicumSorghum bicolor6.0324.8784.6998forward
CNT30360275Sesamum indicumLactuca sativa22.7682.7781.62370forward
CNT30570929Sesamum indicumVitis vinifera27.3166.1781.76444forward
CNT3052765Sesamum indicumAmborella trichopoda8.7928.1586.71143forward
CNT3024639Sesamum indicumPopulus trichocarpa17.7169.982.99288forward
CNT30101075Sesamum indicumOryza rufipogon8.6720.1185.11141forward
CNT3065708Sesamum indicumSelaginella moellendorffii7.9337.1889.92129forward

Expression of CNT30618876

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MKTNMLQVGLVNYHTMQYLFKKNKFTELAPLLSNSTITKN*

Sequence

>CNT30618876
CCCCTCCAAGAATTTCCCACTTTTAACACATTTAATCTGTGCTAACGGTGTTTGATGCCTCCTCACTTGGGCGACTTTCAATTCAGTAAATTGTCTTAAT
CTTTAATTAGCAATTTTGGGTGGAAGTGATCAATGCTATATACATACTAAAGTCAGGAGAGGTGAAAAAGGAGTACCAAGTCTTGGCCTTCTCTTTCCAT
TGGCTTCCTTTCCATATCATTCCATATCAGCTGGAGAATTGACTTCACTTGCTTCTTCCCAGATATGAACCCCATTTGACTGTATGAAAACCAACATGCT
TCAGGTGGGATTGGTCAATTATCATACAATGCAATATCTTTTTAAGAAAAACAAATTTACAGAACTAGCACCACTCTTGTCTAACAGTACTATAACTAAG
AATTGAGTCCCAAAAATGGCCAACAGAACCTCTGCAGTCTCAAGACTCTAGTTCTTGTATACTTGTTCATGCAAAGCGCTCAAGACAACTGGTAGTCAAA
GATCATTTTGGGGTCAATCCCATCACCATTTGACATTCAAATTCCCACTAAAAACACAAAGAACAACTGCAACTATACACACCAACGTTCCTTTTCTTGA
ATAACAATTCCAGTTAACTTACTTTTACACCGTTTCTTCTTAGTGATCTTACAACTTTGGCTTCGACTCTAAAGTGACAAATGCTTCATTTACGACACTT
GGGGTTCGAGTATACCGTAAGCAATTGTTGGAAGTAAACTTTACGTCTTCTTTTCTTCTTTGATTTTTCCAATTTCCAGTTTCAAGAAGAAATCAAAACC
CACAAAATTATGTAAAAGAAACGGAGATAGTATTCACTAGAAGAGAAAAGTGATGTTTACATGGATGATCTACTGGAAGACTCTTAACAGTAAAGCCCCA
CCTTTAAACCCTACAGCAGCCTAACTACAACAAAGGGAAAAATAGTAAAATTATTCTTTTTTCTGATTAAAAAGAAAAAGGAGACCATACTCCTCAAGAA
CTGGTGAATTTAGTTACGGCCTTTGTTCCTTCAGAAACAGCGTGCTTGGCCAGCTCGCCGGGCAACACCAGCCTCACGGCGGTCTGGATCTCGCGAGATG
TAATCGTCGGCTTCTTGTTGTAACGTGCGAGCCGCGACGCCTCCTGCGCCAATTTCTCGAAGATATCGTTGATGAAGCTGTTCATGATCCCCATGGCCTT
GCTCGAAATCCCGATGTCAGGGTGGACCTGCTTCAGCACCTTGAAGATGTAAATCTTGTACGTCTCCGTGCTCTTCTTCATCCGCTTCTTCTTCTTGTCA
CCCGCGGCGGCGGCGCCTTCCTTCGGAAGCTTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGGGACTTCTCCGCCGCCGGAGCCTTCTCGGCAGCGGGCT
TCTTCTCAGCTGGCTTTTTCTCCGCCTTTGGTGCCATTGAAAATGAGAATTTACTCTTCAGAGAATCTGGATTGCTTCAGTGTGAGGAATGGGAGGGAGT
TGTGAGGAAGTTTAGGGTTCATATAGGATTTTGGAGTTGAATATTTATTGGTTGATATTCGCTTAACACGGATATTGGTTTTAAACCGTCGATTGGATGA
AACTTTACACGGCCCTGATTAATTCG