« Back to Sesamum indicum search


Detailed information on CNT30618190


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 8e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30540845Sesamum indicumBrassica napus17.7520.6884.6998forward

Expression of CNT30618190

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSWMGGIGCGLVLFRFSSIQSILHSLYVQDYSS

>peptide 2 (35 aa)
MVVGAGLDLVDRGEPNLGAEMGLERFVGIVSDILV*

Sequence

>CNT30618190
TGTCGGGGGCATAGAGCTTGAGGGAAGACTCGAGCTTCTTGATCTCCTGCTTCTCCCGCTTGGCGAACTGCTTTGAGTCTTTGCAGGGGGTGAGGCCAGA
TATATCAGCTGAGGAGATAGCAAGGGCTGCGGAAAATGCCTTGAGTTGAGAAGAAGGAGAAGAGGAGTGGTGGTGGTGGTCGGAGGGAGAATTTGCCTGG
CATACTATGGTGGTGGGTGCAGGCCTTGATTTGGTGGATAGGGGAGAGCCAAATCTGGGTGCTGAAATGGGTTTAGAGAGATTTGTGGGGATTGTGAGCG
ACATTTTGGTGTAGCTCCTTTGCTTTTTCTTGGATTACTATGGGTTTTGGTTTGAAGAGTTAAAAGGAGCGGTGAGGAAGATGAAGGATGGAGAGATGAG
TTTTAGATTTGGGAGGTTGAGAGATTCTAGTGGTTGTGAGGGAGGATAAGGGGATGAGTTGGATGGGGGGGATTGGGTGTGGTTTAGTGTTGTTCAGATT
CTCCTCTATCCAATCTATCCTTCACTCACTATATGTGCAAGACTACAGCTCA