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Detailed information on CNT30616480


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39677|DCAM2_DIACA, E-value = 3e-117

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512045Sesamum indicumJuglans regia8.621.0383.64110forward
CNT30565226Sesamum indicumActinidia chinensis11.0231.7680.14141forward

Expression of CNT30616480

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPETSVITAAESDWLLKKTEAFFWSRLVMHISRV*

>peptide 2 (43 aa)
MKLPRVYLTEHTVSPSESAILRMGGIESSSFVVPQVFSIILYE*

>peptide 3 (57 aa)
MVHCAGSNISSNWPLERDLRPHPPGSANTPGSEKEISSLFSYPSNPIAEIGNAISTN*

Sequence

>CNT30616480
TTTATGTGCACTCAAAATAAAAATGCATGAGCTGAGGAGCCTTGTACCAAGATCGATGCAATGAAAGTAGGACATTAAAACCACACAATCTCAAAGTTTT
ATTACAAAATACAAAGTAACATAATAACTAGTAGGTTTGCTCAAATACAGACCGAGAGAGACATGAGCAATTTATTCATTCTCCAACACCCAGAGGCTCC
TAAGAAAAACATTTCAACCATAGAGTAATATACGGCAATTAGTAGTAAATCAAACATGGGCTAATATGAGATCATTTCTTCTCAACTTCCTCATCCTCGT
TCTCACTCCAACAGCAATGCAGAATTGATTTGGGGGATCCGCAGCTCCCTTGGCTAGTGAAACTGTTGTACATCATTGCTCCTCCATCTCCAAGCACTTT
GTAGCTCCTTCCTCCACAGGGATCAAAATCAAAATCACATATCTCAGAGTCTGGAAGGATTTTCCTGATGCCAGAAACTTCAGTCATTACAGCCGCAGAG
TCAGATTGGCTCTTAAAGAAAACGGAGGCTTTCTTCTGGTCCAGATTGGTCATGCACATCTCCAGGGTATAAACAGGAGCCAGCTCGCTTGTTTTGGCAC
AGGCAGAGTAGACGTGCCATTTCTCATGTTCATCATCACCACCCATCACATATGCTTTGCTGCTCAGACCAAGTACAGTAAAATGGCTATCCAGAACAGC
CACTTCTTCTGAAAAGCTCCTATGGGGAAAGGGCTGAGCGCCTGGAAAGATGAAACTTCCACGGGTGTATCTAACAGAACACACCGTCAGTCCAAGTGAA
TCAGCCATCTTAAGGATGGGTGGGATAGAAAGCAGCAGTTTCGTAGTCCCACAAGTTTTCAGTATTATCTTGTATGAGTAAACAAAGAGGCTAGACTCTG
ATAGGACATAGGAATCAACTTCGTCATTCTTTAAAGAGGAGACAATGGTGCACTGTGCAGGTTCTAATATTTCATCCAATTGGCCTTTGGAAAGAGATCT
AAGGCCGCACCCGCCAGGATCAGCAAATACACCAGGCTCAGAAAAAGAAATCTCGAGCCTCTTCTCGTACCCTTCAAATCCAATTGCAGAGATTGGCAAT
GCCATTTCGACTAACTAGATAGAAGTGCTGTTTTGAAGCGAAAATAACAAGGATGAGGAAAGAAGAAAAGAAAAGAGGAAGTAGAGCTTAGAGGTTGAAA
CACAATTCTTTTGAACAACAGGATGTGGTTATCGCGAGGCTTGGGGGATCTCAGGATGGCTTTCGGACGCACTGCATTT