« Back to Sesamum indicum search


Detailed information on CNT30615836


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZI2|UXS2_ARATH, E-value = 5e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Sesamum indicumSetaria italica38.1219.4784.25146forward
CNT30530404Sesamum indicumEucalyptus grandis36.2939.1584.17139forward
CNT30316147Sesamum indicumCorylus avellana71.0236.5179.78272forward
CNT30703138Sesamum indicumQuercus lobata82.7760.581.39317forward
CNT30500451Sesamum indicumCoffea canephora50.1317.9981.77192forward
CNT30277485Sesamum indicumChenopodium quinoa42.8219.2381.71164forward
CNT3021247Sesamum indicumCitrullus lanatus37.3415.5385.31143forward
CNT30729539Sesamum indicumCorchorus capsularis31.0717.7187.39119forward
CNT3068683Sesamum indicumQuercus suber78.8561.3881.79302forward
CNT30524728Sesamum indicumPhaseolus vulgaris31.0722.0484.87119forward
CNT30486152Sesamum indicumOlea europaea60.8425.7581.97233forward
CNT30503775Sesamum indicumNicotiana attenuata93.7381.0484.68359forward
CNT30637312Sesamum indicumCapsicum annuum52.7446.9883.17202forward
CNT3091042Sesamum indicumSolanum tuberosum55.8758.6384.58214forward
CNT30182233Sesamum indicumSecale cereale37.3422.9982.52143forward
CNT30223417Sesamum indicumHordeum vulgare32.6455.0784.8125forward
CNT30590847Sesamum indicumMusa acuminata57.748.3680.54221forward
CNT3084565Sesamum indicumVigna radiata30.296.8684.48116forward
CNT30539234Sesamum indicumBrassica napus43.0818.0380165forward
CNT30508626Sesamum indicumSolanum lycopersicum55.3562.7284.43212forward
CNT30145616Sesamum indicumMedicago truncatula52.7444.4983.17202forward
CNT30244810Sesamum indicumAvena sativa38.1218.0784.25146forward
CNT30261302Sesamum indicumBrassica rapa43.0831.9180165forward
CNT30447453Sesamum indicumSaccharum spontaneum49.8733.3382.72191forward
CNT30134072Sesamum indicumLolium perenne32.6417.2284125forward
CNT3066796Sesamum indicumLeersia perrieri28.4628.0281.65109forward
CNT30653881Sesamum indicumRosa chinensis32.6411.780.8125forward
CNT30718631Sesamum indicumMalus domestica golden63.9742.6883.27245forward
CNT30338563Sesamum indicumEragrostis tef56.9252.6679.82218forward
CNT30477892Sesamum indicumArabidopsis halleri29.510.5685.84113forward
CNT30355562Sesamum indicumLactuca sativa50.6533.2881.96194forward
CNT30411763Sesamum indicumPapaver somniferum52.7417.9281.68202forward
CNT30570592Sesamum indicumVitis vinifera44.3952.6382.35170forward
CNT30645151Sesamum indicumCannabis sativa74.1529.881.69284forward
CNT3055709Sesamum indicumAmborella trichopoda72.5842.5181.29278forward
CNT30325711Sesamum indicumAsparagus officinalis27.6833.2386.79106forward
CNT30579496Sesamum indicumEchinochloa crusgalli44.3943.4881.76170forward
CNT30499107Sesamum indicumDigitaria exilis25.5925.0686.7398forward
CNT30594668Sesamum indicumEragrostis curvula58.4966.4780.8224forward
CNT30174824Sesamum indicumVigna angularis60.0524.2180.43230forward
CNT30336663Sesamum indicumCynara cardunculus42.0434.4884.47161forward
CNT30726386Sesamum indicumLupinus angustifolius38.6416.4681.76148forward
CNT3050773Sesamum indicumCucumis sativus53.2636.380.39204forward

Expression of CNT30615836

Peptides detected in this lncRNA

>peptide 1 (35 aa)
GMLQGITIHFTGASKQKTCTNPLSQAQHVQCSHHI*

>peptide 2 (45 aa)
GCCKGSPYTSLVLVSKKRAPTLLARPNMFNVPITFDIIVLTGLNL*

>peptide 3 (51 aa)
MSNELEPWVSEMVKKILFPSCEEVIDHNHTVTTIYQTVHQMAPYKTSSTCD*

Sequence

>CNT30615836
GGGGATGCTGCAAGGGATCACCATACACTTCACTGGTGCTAGTAAGCAAAAAACGTGCACCAACCCTCTTAGCCAGGCCCAACATGTTCAATGTTCCCAT
CACATTTGATATAATTGTCTTGACAGGGTTGAACTTGTAATGTACTGGAGATGCAGGGCAAGCCAAATGGTAGATTTGATCGACTTCTAGCAAAATGGGT
TCGACTACATCATGTCGAATGAGCTCGAACCTTGGGTTTCCGAAATGGTGAAAAAGATTCTCTTTCCGTCCTGTGAAGAAGTTATCGATCACAATCACAC
TGTCACCACGATTTATCAGACGGTCCACCAAATGGCTCCCTACAAAACCAGCTCCACCTGTGACTAAAATCCTCAAACTTTTG