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Detailed information on CNT30613102


BLAST search results

BLAST vs Swiss-Prot:
sp|P0DO53|PIP12_MUSAC, E-value = 2e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631135Arabis alpinaVigna unguiculata23.855.2887.162forward
CNT30502187Arabis alpinaNicotiana attenuata50.773.6387.12132forward
CNT30711465Arabis alpinaGlycine max3519.4985.7191forward
CNT3044720Arabis alpinaPrunus dulcis24.629.7189.0664forward
CNT30163276Arabis alpinaPistacia vera28.4624.0387.8474forward
CNT3096145Arabis alpinaSolanum tuberosum37.317.7483.5197forward
CNT30560770Arabis alpinaActinidia chinensis21.548.6687.556forward
CNT3085870Arabis alpinaVigna radiata23.8514.1287.162forward
CNT30541063Arabis alpinaBrassica napus45.7714.9982.35119forward
CNT30234760Arabis alpinaBrassica oleracea28.4624.2689.1974forward
CNT30552699Arabis alpinaOryza glaberrima40.7726.9782.08106forward
CNT3061285Arabis alpinaArabidopsis lyrata31.9211.4285.5483forward
CNT30261241Arabis alpinaBrassica rapa33.0823.6387.2186forward
CNT30227661Arabis alpinaAnanas comosus28.4632.4686.4974forward
CNT30213185Arabis alpinaHelianthus annuus26.9212.6685.7170forward
CNT30595656Arabis alpinaOryza meridionalis23.4618.2688.5261forward
CNT30704968Arabis alpinaPrunus avium4011.5385.58104forward
CNT30644102Arabis alpinaCannabis sativa23.8514.2587.162forward
CNT30118191Arabis alpinaCitrus clementina37.699.4386.7398forward

Expression of CNT30613102

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MVVPSMTLVVDNSSSKTPSWVDSSSGDWNCRQMDQEHRKSDWNWYAFGWKPFTTPAPQMAPRHCIIM*

Sequence

>CNT30613102
ATGGTCGTCCCAAGCATGACCCTTGTTGTAGATAATAGCAGCTCCAAGACTCCTAGCTGGGTTGATTCCAGTTCCGGTGATTGGAATTGTCGCCAAATGG
ACCAAGAACACCGCAAATCCGATTGGAACTGGTACGCATTTGGCTGGAAACCTTTTACAACTCCAGCACCACAGATGGCTCCAAGACATTGCATTATCAT
GTAGAACACAGCTCTGGTTAGAGACAATTTCCTAGCCAAGAACAGTCCAAATGTAACCGC