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Detailed information on CNT30612815

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3079047	Arabis alpina	Brassica juncea	20.81	4.97	82.64	144	forward
CNT30479196	Arabis alpina	Arabidopsis halleri	19.22	63.94	90.23	133	reverse complement

Expression of CNT30612815

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLMIYGNAIISSPPSDPYIPVGVIIFAVRSNL*

>peptide 2 (60 aa)
MRLDNHHIIFMIFIPTIGSSMAFIPRHKVIDSVENIVVVVHLHRPTSPCKLNEPILGSCS*

Sequence

>CNT30612815
TAGTATCATTGTCTCTCTGTCTTTGATAGATTTTGGAGGAAACTTTAGTAGTGGAATAGTTTCTCTCAATTTATTCATTAGCCAATAAGCTTATTTATAC
AAGAATCTAACTTGTTCACCAAGTTATTTACATATATGATAATAGGAAATCTACCTATTTAGAATATACACAAATATTTACTTTCCTTTCAACTCGATCT
CGTATAATCTCCGAGATCTCCTAACACCCTCCCGCAAGCTCATATGTGCTAACACATATGAGATTGGACAATCACCATATCATATTCATGATCTTCATAC
CCACTATAGGGTCATCAATGGCGTTTATACCTCGCCATAAGGTCATCGATTCGGTGGAGAATATTGTAGTAGTTGTGCACCTCCATCGTCCCACGTCACC
ATGTAAACTGAACGAACCCATTCTTGGCTCATGCTCATGATTTACGGCAACGCCATCATATCATCACCTCCATCGGATCCGTATATACCCGTTGGAGTCA
TCATCTTCGCGGTAAGATCGAATTTGTAGTTGATCAAAAACCACACTAAGACTTTATCTTGGAAATCTGTCTTTTGAATAACAAATCACCACAATCAGAA
GAAGAATATGATCACGTCAATTTCTCCCTTTTTTTTTTTTTTTTTTTTTTTTAAGAAACAAGAACAAGGGATGAAAGAAGAAGAAAAAAAAA