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Detailed information on CNT30610306


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191267Gossypium raimondiiSecale cereale9.4323.5392.580forward
CNT30217757Gossypium raimondiiKalanchoe fedtschenkoi9.7920.792.7783forward

Expression of CNT30610306

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MIGRLKQMNQKYGKSSNSSKWYATYQQMSYNKDAFL*

>peptide 2 (31 aa)
FLLGLYKFYIYINGVDGKNPCQQLIAASASG*

>peptide 3 (30 aa)
MSLCLHGHLTIKLIIYQRLFIGISKIKVVS*

>peptide 4 (30 aa)
MLLTNKCHTTKMHFFKFQCHYVCMGTLQLS*

>peptide 5 (30 aa)
MVCYLPTNVIQQRCISLNFNVTMFAWAPYN*

Sequence

>CNT30610306
CTTCCTGCTAGGGCTTTATAAGTTTTATATATATATAAATGGTGTAGATGGTAAAAATCCTTGCCAGCAATTGATTGCCGCCTCTGCATCCGGTTAGGGT
TCAACGAATAACCGAGAAGGCGGCATCAAGTTTCCTTCTATCCTATCGCCATGAGAGCCAAGTGGAAGAAGAAGCGCATGAGAAGACTGAAGCGGAAGCG
CCGAAAGATGAGGCAGAGATCCAAGTAGACAGAACCATCAGCCCCTCTGTTATACGAGGTTTCTAAATGTCTTAGCTAATATCGGTGTACTTTTAGGGTC
CACTTAGTTATCTGCCATTTTTATTTCAGTTTTAAGCTTTTTTTTTCTCTTGGGTTTCTATTGTCTTTCAAGTTGGTGCTAATCCAGCAGTGGGATGATG
TATCATCGTTGAGAACAGTGAATTGCAAAAAAAAAAAAAGGAGCAGATTTTAAGATTGGAGTTTAATTTGAATTTTCTCTTCTAGTCTCCAATATAATAA
AAAAATTTCTCTGCTAGTCTCCAGTATAATAGAAAGAACCCTAGTAAATCGACGTGTTTTCATGGGTAAACTAGCGAGAGCTAAAATGTTAAGATGATTG
GGAGACTGAAACAGATGAATCAGAAATACGGAAAAAGCAGCAATAGCAGTAAATGGTATGCTACTTACCAACAAATGTCATACAACAAAGATGCATTTCT
TTAAATTTCAATGTCACTATGTTTGCATGGGCACCTTACAATTAAGTTAATAATCTACCAAAGGCTCTTTATTGGCATCTCAAAAATTAAGGTTGTTTCC
TAATTTGTAAATTTTGATTCCATGGCGGCTTTCATTGTTGTTCCCAAC